EGAF00005282728 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282728
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	716849
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	24030	3.352170401297902	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	14875	2.0750534631421678	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	8797	1.2271761556478422	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	5056	0.7053089283796169	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	4276	0.5964994022451032	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	2848	0.39729426978345506	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	2501	0.34888798059284454	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1462	0.20394811180597308	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1016	0.14173138275982808	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	801	0.11173901337659675	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	2005	0.0	94.38903	1
GTCTCTC	2030	0.0	91.46062	2
CTGATGG	7275	0.0	87.24001	1
GGCTCAA	7365	0.0	85.691414	6
GCTCAAA	7400	0.0	85.57786	7
CTCAAAC	7480	0.0	84.66259	8
TCAAACA	7615	0.0	83.468475	9
TCTCTCA	2265	0.0	81.97133	3
TGGCTCA	7775	0.0	81.08008	5
GATGGCT	8060	0.0	78.39168	3
AGTCTCT	2565	0.0	72.37899	1
ATGGCTC	8815	0.0	72.00402	4
CGATGCG	30	0.0019934268	71.9632	7
TGATGGC	8935	0.0	70.71482	2
AGCTGGT	2695	0.0	68.37744	9
CTCTCAG	2815	0.0	66.21126	4
TCAGCTG	2820	0.0	65.58348	7
TCCGATC	70	2.4566543E-7	61.682743	6
TTCCGAT	70	2.4566543E-7	61.682743	5
CAGCTGG	3060	0.0	60.674854	8