EGAF00005282734 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282734
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1596591
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	56611	3.5457421468616572	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	34583	2.166052545705193	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	20022	1.254046903684162	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	11767	0.7370077872166384	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	10388	0.6506362618854797	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	6340	0.3970960627988007	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	5718	0.35813805789961234	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	3438	0.21533379556818244	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	2625	0.16441280202631733	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1960	0.12276155884631693	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG	1659	0.10390889088063254	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTATG	1614	0.10109038570303853	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	4745	101.552734	1
GTCTCTC	4930	95.591606	2
TCTCTCA	5235	89.88766	3
CTGATGG	16725	87.29499	1
GGCTCAA	17485	83.27842	6
CTCAAAC	17640	82.755875	8
GCTCAAA	17590	82.69948	7
TCAAACA	17975	81.22883	9
TGGCTCA	18515	78.67708	5
GATGGCT	18945	76.83167	3
TCAGCTG	6280	75.30225	7
AGCTGGT	6315	74.90368	9
AGTCTCT	6555	72.41264	1
TGATGGC	20705	70.40275	2
ATGGCTC	20995	69.71536	4
CTCTCAG	6840	69.54066	4
CTCAGCT	7040	67.582	6
CAGCTGG	7045	67.23174	8
TCTCAGC	7390	64.375175	5
TTCCGAT	215	56.907818	5