EGAF00005282737 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282737
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1308895
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	46056	3.5186932488855107	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	19129	1.4614617673686583	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	14575	1.1135346991164303	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8460	0.6463467275831903	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	5832	0.44556668029139085	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4505	0.34418345245416937	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	3642	0.27824997421489117	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1930	0.14745262225006592	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1587	0.12124731166365521	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1474	0.11261407523139749	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	3315	101.16224	1
GTCTCTC	4205	100.120384	2
TCTCTCA	4555	91.80231	3
CTGATGG	12385	87.44935	1
CTCAAAC	12730	84.090706	8
GGCTCAA	12775	83.78488	6
GCTCAAA	12910	82.744644	7
AGTCTCT	5165	81.64759	1
TCAAACA	13265	80.82008	9
GATGGCT	13480	79.98117	3
TGGCTCA	13630	78.37069	5
ATGGCTC	14075	76.395546	4
AGCTGGT	5600	74.31416	9
TCAGCTG	5630	74.02908	7
CTCTCAG	5740	72.97547	4
CTCAGCT	5940	70.40529	6
TGATGGC	15680	68.98355	2
CAGCTGG	6230	66.90459	8
TCTCAGC	6595	63.303658	5
CCGATCT	155	51.084976	7