FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences939456
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTACC92203098.14509673683493No Hit
ATCTTACA43060.45835036446624433No Hit
ATCATACC20010.21299560596770897No Hit
AACTTACC18430.19617736221813475No Hit
ATCTAACC15750.1676502145922747No Hit
ATATTACC12990.13827151032086654No Hit
ATCTTCCC9650.10271902036923496No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)