EGAF00005282743 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282743
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	939456
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	36170	3.850100483684175	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	15158	1.6134869541521903	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	11419	1.2154906669391647	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	7058	0.7512858505347776	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	4675	0.49762841474214864	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	3686	0.3923547244362695	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	3020	0.3214626336943934	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1561	0.16615999046256558	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1357	0.14444529600109	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1109	0.11804703998910009	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	2475	97.20343	1
GTCTCTC	3485	94.97865	2
TCTCTCA	3660	91.223724	3
CTGATGG	9360	89.42122	1
CTCAAAC	9800	85.93029	8
GGCTCAA	9860	84.95584	6
AGTCTCT	3885	84.91508	1
GCTCAAA	9955	84.08177	7
TCAAACA	10170	83.02518	9
GATGGCT	10310	81.30892	3
TGGCTCA	10420	80.32101	5
ATGGCTC	10615	78.773506	4
TCAGCTG	4490	74.0558	7
CTCTCAG	4520	73.71173	4
AGCTGGT	4495	72.7041	9
TGATGGC	11790	70.919106	2
CTCAGCT	4665	70.80733	6
CAGCTGG	4785	69.04262	8
TCTCAGC	5175	63.829216	5
TCCGATC	115	62.57766	6