FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences962609
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTACC94399198.06588137031754No Hit
ATCTTACA45460.4722582066030964No Hit
ATCATACC21060.21878041863311065No Hit
AACTTACC18280.18990057229882537No Hit
ATCTAACC15650.16257899105451953No Hit
ATATTACC14010.14554195940407788No Hit
ATCTTCCC12670.13162145793359506No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)