EGAF00005282757 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282757
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1027360
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	40828	3.9740694595857344	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	17189	1.673123345273322	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	13023	1.2676179722784613	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	7671	0.7466710792711415	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	5282	0.5141333125681358	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4192	0.4080361314437004	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	3298	0.3210169755489799	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1782	0.1734542906089394	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1577	0.1535002336084722	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1309	0.12741395421273946	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTCTC	3865	97.77067	2
TCTGATG	2885	93.15039	1
TCTCTCA	4120	92.06425	3
CTGATGG	10515	89.62314	1
AGTCTCT	4380	87.18132	1
CTCAAAC	11135	84.88199	8
GCTCAAA	11240	84.08905	7
GGCTCAA	11200	84.06391	6
TCAAACA	11495	82.28628	9
GATGGCT	11745	80.40044	3
TGGCTCA	11885	79.336105	5
ATGGCTC	12305	77.033875	4
AGCTGGT	5095	73.89219	9
TCAGCTG	5115	73.603264	7
CTCTCAG	5205	73.01142	4
TGATGGC	13170	71.86852	2
CTCAGCT	5335	70.96941	6
CAGCTGG	5595	67.80341	8
CCGATCT	130	66.44755	7
TCCGATC	130	66.44431	6