FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1052880
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGGTGT103660698.45433477699262No Hit
TATGGTGA23930.2272813615986627No Hit
TAAGGTGT15870.15072942785502622No Hit
AATGGTGT15160.14398601929944535No Hit
TATGGTGG14260.1354380366233569No Hit
TATGGGGT10790.10248081452777144No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)