FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences924189
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAACCTG90383697.79774483357842No Hit
CGACCCTG49570.5363621510318777No Hit
CGCACCTG44040.4765259054154507No Hit
CGAACCTA19060.2062348718714462No Hit
CGAACCAG13550.14661503220661573No Hit
CGAACCTC11330.12259397157940637No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)