FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences954342
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAACCTG93386597.85433314262602No Hit
CGACCCTG53060.5559851709345287No Hit
CGCACCTG45860.4805405190172915No Hit
CGAACCTA19980.20935890907033328No Hit
CGAACCAG14070.1474314239549344No Hit
CGAACCTC10690.11201435124934248No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)