EGAF00005282779 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282779
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1282410
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	47405	3.696555703714101	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	19954	1.5559766377367612	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	14875	1.1599254528582903	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	8933	0.6965790971686122	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	6036	0.47067630476992534	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4833	0.37686855217910026	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	3768	0.2938217886635319	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1989	0.15509860341076567	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1706	0.13303077798831886	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1501	0.11704525073884327	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTCTC	4515	98.509705	2
TCTGATG	3500	96.31985	1
TCTCTCA	4775	93.43633	3
CTGATGG	12250	87.44054	1
AGTCTCT	5255	84.98787	1
CTCAAAC	13070	81.608955	8
GGCTCAA	13110	81.35044	6
GCTCAAA	13240	80.388626	7
TCAAACA	13660	78.13986	9
GATGGCT	13820	77.16807	3
TCAGCTG	5815	76.97595	7
AGCTGGT	5840	76.658394	9
TGGCTCA	14030	76.118576	5
CTCTCAG	5940	75.35609	4
CTCAGCT	6020	74.23514	6
ATGGCTC	14465	73.978745	4
CAGCTGG	6300	71.28683	8
TGATGGC	15530	69.096245	2
TCTCAGC	6710	66.923164	5
TCCGATC	155	64.99961	6