EGAF00005282782 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282782
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1307685
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	48105	3.6786382041546704	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	19940	1.524832050532047	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	15243	1.1656476903841522	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	9183	0.7022333360098189	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	6059	0.46333788335875997	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	4839	0.37004324435930674	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	3760	0.28753101855569196	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	2039	0.1559244007540042	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1721	0.13160661780168773	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGGATG	1698	0.12984778444350129	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTCTC	4090	0.0	102.05324	2
TCTGATG	3435	0.0	100.899445	1
TCTCTCA	4425	0.0	94.16814	3
CGCTCAA	40	6.386981E-7	89.9736	6
CTGATGG	12445	0.0	88.70219	1
CTCAAAC	13285	0.0	83.60382	8
GGCTCAA	13390	0.0	82.62251	6
AGTCTCT	5020	0.0	82.534325	1
GCTCAAA	13470	0.0	82.34871	7
TCAAACA	13860	0.0	80.08653	9
TTCCGAT	145	0.0	79.42194	5
GATGGCT	13870	0.0	79.38778	3
TGGCTCA	14280	0.0	77.520515	5
AGCTGGT	5415	0.0	76.836525	9
TCAGCTG	5485	0.0	75.853035	7
CTCTCAG	5520	0.0	75.49093	4
ATGGCTC	14725	0.0	75.2698	4
CTCAGCT	5705	0.0	73.17748	6
TGATGGC	15825	0.0	69.80503	2
TCCGATC	165	0.0	69.797714	6