FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences626165
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCATA60924497.29767712982999No Hit
AGCCCATA76051.2145361047008376No Hit
AGACCAAA21770.34767193950476316No Hit
AGACAATA9530.1521963060854567No Hit
AGACTATA8050.12856036348246866No Hit
AGACCATT7520.1200961407935608No Hit
ACACCATA6320.1009318630073543No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)