FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005282792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643560
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCATA62625497.3108956429859No Hit
AGCCCATA81861.2719870719124868No Hit
AGACCAAA22310.34666542358132885No Hit
AGACAATA8790.1365840014917024No Hit
AGACTATA8300.1289701037976257No Hit
AGACCATT7070.10985766672882093No Hit
ACACCATA6480.10068991236248369No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)