FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences971979
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGATCT95749698.50994723137022No Hit
GAGGATCA28220.29033549078735243No Hit
GAGGATCG17250.1774729700950329No Hit
GAGGAACT15950.16409819553714636No Hit
GAGGCTCT12530.12891225016178334No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)