EGAF00005282805 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005282805
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1112087
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	33144	2.9803423653005567	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	14992	1.34809596731191	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	10631	0.9559503887735401	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	6306	0.5670419670403485	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	4699	0.42253888409809665	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	3460	0.3111267373865534	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	2797	0.25150909955785833	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	1496	0.13452184945961962	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1230	0.11060285751024876	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	2465	92.32323	1
CTGATGG	9305	86.142914	1
CTCAAAC	9530	83.901344	8
GGCTCAA	9655	82.58776	6
GTCTCTC	3480	82.3024	2
GCTCAAA	9720	82.03548	7
TCAAACA	9890	80.99648	9
TCTCTCA	3530	80.93643	3
TGGCTCA	10010	79.51504	5
GATGGCT	10155	78.59227	3
ATGGCTC	10495	75.9776	4
AGTCTCT	3915	72.84575	1
TGATGGC	11675	68.41869	2
CTCTCAG	4285	66.33984	4
AGCTGGT	4350	66.016266	9
CCGATCT	245	64.62266	7
TCAGCTG	4460	64.38227	7
TCCGATC	235	64.31017	6
CTCAGCT	4645	61.5082	6
CTTCCGA	255	59.266235	4