FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences859761
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATGAG84679098.49132491471467No Hit
CTTAAGAG17270.20086977660070648No Hit
CATATGAG14140.16446431043045684No Hit
CTTATGAA11720.1363169531997846No Hit
CGTATGAG10060.1170092618762656No Hit
CTAATGAG9890.11503196818650764No Hit
CTTATGAC8910.10363345162202053No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)