FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005282850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005282850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8669787
Sequences flagged as poor quality0
Sequence length76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGTACC29250.016.39759441
ATAGTAC29350.016.224540
TTAATCA58400.015.9999458
TCATTAC65250.015.822371512
ATTAATC54450.015.6823827
GTCCCTA21250.015.6477661
GGTCCTA31450.015.24561850
GTCCTAT41700.015.19121951
TAATCAT67200.014.8422829
ATTACCT48150.014.24598214
CATGCTA46650.014.10445568
CCTATTA37850.013.7765494
ATCATTA77650.013.74622411
CATTACC49400.013.67289313
TACCTCG35400.013.54393716
ATGCTAA47550.013.39587269
CTATTAA47850.013.3109645
TCCTATC46350.013.28971252
AATAGTA42850.013.15574839
TATTAAT59600.012.6831636
Produced by FastQC (version 0.11.5)