EGAF00005284598 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005284598
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34228280
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACT	108742	0.31769636102077	No Hit
GTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCC	80784	0.23601536507239043	No Hit
CTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGATTTTTCTCTTGCGTCT	71134	0.20782230366235172	No Hit
CTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGAAATTTTTAATG	70938	0.20724967775184727	No Hit
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGGGCAGGCGGTGCCTCTAATACTGGTG	62440	0.18242225434640594	No Hit
CCCCAACCGAAATTTTTAATGCAGGTTTGGTAGTTTAGGACCTGTGGGTTTGTTAGGTACTGTTTGCATTAATAA	44477	0.12994225827298364	No Hit
GTTTGCATTAATAAATTAAAGCTCCATAGGGTCTTCTCGTCTTGCTGTGT	41940	0.12253025860487292	No Hit
CCCTGTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCAT	41694	0.12181155465597453	No Hit
GTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTTCTCGTCTTGC	41192	0.12034493115049895	No Hit
CTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTA	38408	0.11221130597272198	No Hit
CGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGATTTTTCTCTTGCGTCTCTGTCTTCTTC	37610	0.109879900479954	No Hit
CTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGATTTTTC	37146	0.10852429628365784	No Hit
GTTGATTGTAGATATTGGGCTGTTAATTGTCAGTTCAGTGTTTTAATCTG	36644	0.10705767277818226	No Hit
CCCAGATTTATTGAAAATAATACAGCACTACAGAAAAAATTCAAACAGGT	36499	0.10663404646683972	No Hit
GTCATTTTTGTCAGTGGCCAGTTTGTGCAGTTCCAGTAGTGACTGATTCA	35820	0.10465030670544942	No Hit
GTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGT	35665	0.10419746478642807	No Hit
CTCCATTGCATTCAGCCCGCTCTCCCAGTCATCACAGTCTGGTTTCTTGA	35262	0.10302007579697256	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTTATCG	24765	31.158226	70
ACCGCGT	8295	29.611788	6
AGACCGC	8415	29.023903	4
AATACGG	8970	27.378992	32
CGCGTTC	9060	27.181831	8
CCGCGTT	9010	27.17839	7
GAACGAT	9035	27.05987	45
GCACTAC	13405	26.843298	25
TACGGAG	9910	24.994537	34
ATACGGA	10020	24.649652	33
CGACTTA	23460	23.86935	67
GACGGCA	10495	23.718555	63
CGAGGCG	14850	23.652126	54
ACTTATC	25840	23.518164	69
GATTTAT	17895	23.336391	5
AGAACGA	10520	23.336208	44
AGCACTA	15760	22.898247	24
CGAAACG	850	22.888702	3
AGATTTA	16715	22.780264	4
CACTACA	16005	22.634533	26