FastQCFastQC Report
Wed 11 May 2022
EGAF00005284825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005284825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences351064530
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGAGTT11928733233.978748009660784No Hit
CGACGTCA11586090933.00273855635601No Hit
ATGTCCAG9812351427.95027854280807No Hit
GCTATAGC92182852.6258092778555553No Hit
NACGAGTT6344040.18070865775018627No Hit
NGACGTCA6108090.17398767115549954No Hit
TACGAGTA5376360.15314449454634452No Hit
NTGTCCAG5178700.14751419062472645No Hit
GCTATATC3754740.10695298667740658No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)