FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005284877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005284877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences352793930
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCTCGGTGGTCGC24108430.6833572788511412Illumina Single End PCR Primer 1 (100% over 16bp)
AGGAGGTTGGGTGTCC5293830.15005445246747867No Hit
CGTCAACCTTCGGGCT4185660.11864319774436027No Hit
CTCGGTTTGCCTACGG3690390.10460469090270345No Hit
TAATTGCCTAGCTTGT3585350.10162731541327823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)