FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005284904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005284904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences362818972
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCCGCT12867130235.464325718887714No Hit
CATTGATA10444460728.78697506479898No Hit
ATGGTTAG10436608528.765332866882165No Hit
GCAAACGC100362022.7661734293211104No Hit
NGCCCGCT23247460.6407454348886694No Hit
NATTGATA19504210.5375741486859182No Hit
NTGGTTAG19436640.5357117874199808No Hit
TGCCCGCA4074350.11229704933952572No Hit
ATGGTTAA3820700.10530595957920304No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)