FastQCFastQC Report
Wed 11 May 2022
EGAF00005284957

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005284957
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences330229146
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGAGCG8596707426.03255195409069No Hit
CGGTGAGC8076197724.456344322799417No Hit
ATAACCTA7897985823.916682993208603No Hit
GATCTTAT7450166122.560595241947542No Hit
NCCGAGCG7912790.23961513076135318No Hit
NGGTGAGC7418460.22464582820318346No Hit
NTAACCTA7339610.2222580922642122No Hit
NATCTTAT6921690.20960263755761885No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)