FastQCFastQC Report
Wed 11 May 2022
EGAF00005284981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005284981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences352793930
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGAATG9236727926.1816519915748No Hit
CTTAGTCA9089396525.764038797379534No Hit
GAGCCCAT8974641625.438764210030484No Hit
ACATTGGC7224450520.477819728927876No Hit
NGCGAATG7737780.21932860352784417No Hit
NTTAGTCA7629760.2162667594649375No Hit
NAGCCCAT7488160.2122530849666263No Hit
NCATTGGC6064680.1719043181950438No Hit
TGCGAATA4755640.13479937140641848No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)