FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005285019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005285019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences323890478
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTCACT8730804926.95604067742924No Hit
CGAAGTTG7745299223.913327887336038No Hit
TTCGTGAA7619917623.526216784921967No Hit
GAGCACGC7301304722.542511113895728No Hit
NCTTCACT12655340.3907289920390929No Hit
NGAAGTTG11257830.3475813821238672No Hit
NTCGTGAA11126470.34352569018716256No Hit
NAGCACGC10564210.3261661184124098No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)