EGAF00005286827 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005286827
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26555552
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGAGGATTCAACCCGGCGGCGGGTCCGGCCGTGTCGGCGGCCCGGCGGAT	68583	0.25826237767529747	No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAAC	62480	0.2352803662300072	No Hit
GGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCG	49484	0.18634144754362478	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	43632	0.16430462450940578	No Hit
GGTCCGCGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGTCCGGCCGT	40935	0.1541485562039908	No Hit
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA	36506	0.13747031129309606	No Hit
GTCCGCGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGTCCGGCCGTG	35499	0.1336782605761688	No Hit
GGGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAA	34562	0.13014980822089484	No Hit
GGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGG	34134	0.12853809252392873	No Hit
GGAGTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGC	32836	0.1236502257606997	No Hit
GTTACAGCCCCCCCGGCAGCAGCACTCGCCGAATCCCGGGGCCGAGGGAG	29923	0.1126807682250401	No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC	28933	0.10895273425308574	No Hit
CGGGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAA	27989	0.10539792206164646	No Hit
GGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACG	27636	0.1040686331807375	No Hit
GGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGA	27041	0.10182804710668412	No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA	26587	0.1001184234468182	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGCGCGT	18525	38.159203	4
GAGTCTA	12900	37.184196	2
TGGCGCG	19775	35.930435	3
TAACACG	15955	33.672417	4
AGTCTAA	13985	33.594288	3
GTCTAAC	16700	32.944553	1
CGCGTGC	21875	32.77842	6
ACGTGCG	17290	31.446991	8
AACACGT	17865	30.31499	5
CCGTCGG	11715	30.07508	7
TCTAACA	19275	28.5434	2
GGTCGAC	8550	27.541218	1
GCGCGTG	26575	27.144985	5
CTAACAC	20470	26.70585	3
ACACGTG	20525	26.668808	6
GATTCAA	42475	26.200817	5
GGATTCA	43950	25.586203	4
TCGACCC	9585	25.566866	3
CAACCCG	42105	25.465216	9
CGGTGGC	19900	24.94433	1