FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005294049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005294049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11362821
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAG1367941.2038735803371363Illumina Single End PCR Primer 1 (100% over 30bp)
GGCAGAGACAGAGGCGGCGGCCCGGGGGATCCGGTACCCCCAAGGCACGC147750.13002932986447643No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG144860.12748594737169583No Hit

[WARN]Adapter Content

Adapter graph