FastQCFastQC Report
Wed 11 May 2022
EGAF00005296681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005296681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53395735
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTTGTGATTCACGTTGCAGATGTAGGTCTGGGTGCCCAAGCTGCTG590120.11051819026369804No Hit
GTAGTGGTTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACGTTCCC536510.10047806252690406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)