FastQCFastQC Report
Sat 28 May 2022
EGAF00005296741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005296741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53156992
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG1956290.36802120029666086No Hit
GCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAACATCCTCTCCAGGG859690.1617266078562158No Hit
GCCGGCTTCACGCTCAGGAGAATAACGCTACCTCTCTTCCTCGTGGTTTTC735390.13834304243550877No Hit
GGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAG719900.13542903255323402No Hit
GGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGA584730.11000058092075639No Hit
GGCCGGTGCAAGGAGGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGA543810.10230262841057673No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)