FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005297065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005297065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44089534
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT930910.21114081178540012No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG602430.13663786965859062No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG447510.1015002789550917No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)