FastQCFastQC Report
Sat 28 May 2022
EGAF00005297597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005297597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53482922
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT2478650.4634470046344887No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG830790.15533743649982326No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA694300.12981714050702017No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)