FastQCFastQC Report
Sat 28 May 2022
EGAF00005297607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005297607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53404159
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGAT4884430.914616032058477No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG897150.1679925340646222No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT846270.1584651862039434No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGATCATCAA623420.11673622648003874No Hit
GGGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCAGCGAAGCAACGCC534530.10009145542391182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)