FastQCFastQC Report
Thu 12 May 2022
EGAF00005297818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005297818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53049927
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA789110.14874855529961425No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG663440.12505955003481908No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG605570.11415095820961263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)