FastQCFastQC Report
Fri 27 May 2022
EGAF00005297849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005297849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69231342
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT1844390.2664096847927634No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG729640.1053915725048346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)