FastQCFastQC Report
Fri 27 May 2022
EGAF00005298275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005298275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97872487
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT8465340.8649356177083759No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA1489820.1522205111636736No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG1293790.1321913889855481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)