EGAF00005298353 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005298353
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34388417
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	419260	1.21918958933178	No Hit
CTTTGATCTTCTTCCCCTTCTTTTCTTCCCCTTCCCCTTCTTTTCAATTTC	58475	0.17004272107087687	No Hit
CTTCCGTACGCCACATGTCCCGCGCCCCGCCGCGGGGCGGGGATTCGGCGC	53630	0.1559536747504254	No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA	47816	0.13904681916588368	No Hit
CTTTTCTTCCCCTTCCCCTTCTTTTCAATTTCTCCCACGTCAAGAGAAAAG	38517	0.11200573728066635	No Hit
CAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA	37108	0.10790842742194268	No Hit
CTTTTCTTCCCCTTCTTCTTTCCTTCTTTGATCTTCTTCCCCTTCTTTTCT	36446	0.10598336061819885	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAGACC	59720	33.29622	2
CAGACCG	60195	32.924797	3
CTCAGAC	61990	32.755344	1
AGACCGC	61235	32.340736	4
GACCGCG	62320	31.763235	5
ACCGCGT	63305	31.301	6
CCGCGTT	69280	28.598223	7
CGCGTTC	71270	27.752346	8
GCGTTCT	74550	26.57961	9
GAACGAT	73960	26.452509	45
AATACGG	77475	25.300016	32
AGAACGA	77995	25.098293	44
ATACGGA	78565	24.892132	33
CGTTCTC	80020	24.878185	10
CCCAATA	79190	24.814714	29
TACGGAG	78900	24.755075	34
CAATACG	79810	24.624653	31
AAGAACG	79485	24.616236	43
CCCCAAT	80305	24.436657	28
ACGGAGA	80965	24.168196	35