FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005298861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005298861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length117-120
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTTTTTCACTTCTTAGTGCCTTTTCTCAGGGGAGAGGCCATCACTTGA637.5No Hit
GTAGTCCACCCTGTAACAATGAGCAGTTCTTCGGGCCAGGGACACGGCTC425.0No Hit
GTGTCCTGTCTCCTCATCTGCAAAATTAGGAAGCCTGTCTTGATTATCTC318.75No Hit
CCATAAAGAGTCTTGGGGGATCCTGCCCTGACTCTGTCATGGGGACCAGG16.25No Hit
CCATAAAGAGTCTTGGGGGATCCTGCCCTGACTCTGTCATGGGCACCAGG16.25No Hit
AGGCAGTGGTCACAACTCTCCCCAGAGAAGGTGGTGTGAGGCCATCACGG16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)