FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005299270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005299270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191581437
Sequences flagged as poor quality0
Sequence length36-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGG2687640.1402870780220737No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG2111010.11018865047974351No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)