EGAF00005299775 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005299775
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1578008
Sequences flagged as poor quality	0
Sequence length	35-101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATT	5043	0.3195801288713365	No Hit
AAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAC	4863	0.3081733425939539	No Hit
CCTTTCTTTTCATAGAGCAGTTAGGAAACACTCTGTTTGTAAAGTCTGCA	2421	0.15342127543079628	No Hit
ACTCTGTGAGTTGAACGCACACATCACAAAGGAGTTTCTGAGAATCATTC	2406	0.15247070990768108	No Hit
AGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGA	1987	0.1259182462953293	No Hit
GAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATG	1771	0.11223010276247015	No Hit
ATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATC	1658	0.10506917582166883	No Hit
TGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATT	1636	0.10367501305443318	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGCC	295	78.46555	2
TGATCGC	305	73.01967	1
CCGAATA	595	71.45465	2
GTCTATC	1930	69.02346	5
AACGGCG	105	67.48495	3
CGGCGCA	110	64.41745	5
ACGGCGC	110	64.41745	4
CAGTCTA	2155	64.00893	3
CCCGAAT	635	63.42888	1
CGTCATT	685	62.06645	3
AGTCTAT	2220	61.283623	4
CGCCATT	400	59.049328	5
CGAATAG	525	58.486958	3
CTCGTCA	700	58.215984	1
TCGTCAT	740	57.453403	2
CTATCAT	2315	52.65034	7
TCCAGTC	2700	52.123615	1
GTGAGTT	2470	51.06452	6
TGAGTTG	2650	50.09483	7
CGAATAC	265	49.9134	3