FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005299798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005299798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1130507
Sequences flagged as poor quality0
Sequence length35-101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAC33080.2926120758208485No Hit
TCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATT27670.24475744068811603No Hit
GAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATG16200.1432985377357239No Hit
CCTTTCTTTTCATAGAGCAGTTAGGAAACACTCTGTTTGTAAAGTCTGCA15620.138168096261235No Hit
ACTCTGTGAGTTGAACGCACACATCACAAAGGAGTTTCTGAGAATCATTC14900.1317992723618695No Hit
AGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGA13220.11693868326334998No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)