FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences276
Sequences flagged as poor quality0
Sequence length199-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTATGCCAGGA4014.492753623188406No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG3211.594202898550725No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTGTGCCAGGA259.057971014492754No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG217.608695652173914No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGG134.710144927536232No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA113.985507246376811No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTATCGGGCCAGTG103.6231884057971016No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC82.898550724637681No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG82.898550724637681No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC51.8115942028985508No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG51.8115942028985508No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTGATCGTCCAGAA31.0869565217391304No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG20.7246376811594203No Hit
CCTGTTCGATACCCACACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC10.36231884057971014No Hit
CCTATTCGCTCCCCACGCTTTCGCACCTCAGCGTCATTTACGGCCCATAG10.36231884057971014No Hit
CCTGTTTGATCCCCTCGCCTTCGAGCCTAAGCGTCAGTTGCGCTCCAGTC10.36231884057971014No Hit
CCTGTTTGCTACCCACGCTTTCGCGCCTCAGCGTCAGTTTCTGACCAGAA10.36231884057971014No Hit
CCTGTTCGCTCCCCTCGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAA10.36231884057971014No Hit
CCTGTTCGCTACCCACGCTTTCGCTCCTCAGCGTCAGTTACGGTCCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTGAGCGTCAGTGTTATCCCAGGG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGCA10.36231884057971014No Hit
CCTGTTCGCTCCCCCGGCTTTCGCGCCTCAGCGTCAGTGATGGCCCAGAG10.36231884057971014No Hit
CCACCTTCCGCCCCACGCTCTCGCACATGAGCTCTAGTCCTTTTTTCTGC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTACAGGTCCAGGG10.36231884057971014No Hit
CCTGTTTGATACCCACACCTTCGAGCCTAAATGTCAGTTGCAGCTTAGCA10.36231884057971014No Hit
CCTGTTAGCTCCCCACGCCTTCGCTCCTCAGCGTCAGTAACGGCCCCGTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTCCGTCCAGAA10.36231884057971014No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGTTCTCCCGTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTGAGCGTCAGTGTTCTCCCAGGG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTTACAGTCCAGAG10.36231884057971014No Hit
CCTGTTTGATCCCCTCACTTTCGCGCCTCAGTGTCAGTTACAGTTTTGTG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCCTAGTCCAGAG10.36231884057971014No Hit
CTCATTCCCTCCCCTCACCTTCCCCCCTCAGCCTCAGCTTTTGCCCACAA10.36231884057971014No Hit
CCCGTTCGCTCCCCTGGCTTTCGCTCCTCAGCGTCAGTTTCCGTCCAGAA10.36231884057971014No Hit
CCTGTTCGCTCCCCACACTTTCGATCCTCAGCGTCAGTAACGGCCCAGTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTACAGGTCCAGTG10.36231884057971014No Hit
CCCGTTGGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.36231884057971014No Hit
CGAATCCGCGTCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.36231884057971014No Hit
CCTGTTCGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTTACAGCCCAGAG10.36231884057971014No Hit
TCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.36231884057971014No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTACACTCCCGTA10.36231884057971014No Hit
CCTGTTCGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTATCGTGCCAGTG10.36231884057971014No Hit
CATAATCGACCAGGTAAACTGACCTGCACCCGCAGTGCTTCAGATTCCAC10.36231884057971014No Hit
CCTGTTCGATACCCGCACCTTCGCGCTTCAGCGTCATTTGCGCTCCCGTC10.36231884057971014No Hit
CCTGTTTCCTACCCACGCTCGCGGGCATGAACGTCAGCGCTAGCCCAGCC10.36231884057971014No Hit
CCTGTTCGCTCCCCCCGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG10.36231884057971014No Hit
CCTGTTTGATACCCACGCTTTCGCACATTAGCGTCAGTAACTGTCCAGTA10.36231884057971014No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTGCAGCTTAGCA10.36231884057971014No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTGAGCGTCAGTACAGGTCCAGGG10.36231884057971014No Hit
CCTATTTGCTCCCCTCGCTTTCGCGACTGAGCGTCAGTTATGCGCCAGAT10.36231884057971014No Hit
CCCGTTCGCTCCCCTGGCTTTCGCACATCAGCGTCAGTTGCAGTCCAGAA10.36231884057971014No Hit
CCTGTTCGCTCCCCTTGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTGAGCGTCAGTACACGTCCAGGG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTGTTATCCCAGGG10.36231884057971014No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGCA10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGTA10.36231884057971014No Hit
CCTGTTCGCTCCCCTAGCTTGCGCACTTCAGCGTCAGTTATCGTCCAGTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTCATCGTCCAGTA10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCCTTCGCTCCTCAGCGTCAGTTACAGCCCAGTA10.36231884057971014No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTGATCGTCCCGAA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATCAGCGTCAGTTGCATCCCAGAG10.36231884057971014No Hit
CCTGTTTGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTTACTGACCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTATTATCCCAGTG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTTCATGAGCGTCCGTACAGGTCCAGGG10.36231884057971014No Hit
CCTGTTTGCTACCCACGCTTTTGAATCTCAGTGTCAATATTATGCCAGGA10.36231884057971014No Hit
CCTGCTCTAGCCCGACAGCTTCGCTACTCATCGTTCATCACTTTTGCTTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CCTGTCTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG10.36231884057971014No Hit
CCCGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACCGTCCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CAGGCTCGCGCCCCACGCTTTCGTGCATCAGTGTCAGAACCAGCCCGGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTTTCAGTCCAGTA10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTTGCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTCTCGTACCTCAGTGTCAGTAGCAGTCCAGAA10.36231884057971014No Hit
CCTGTTCGCTCCCCCAGCTTTCACGCCTCAGCGTCCGTCTCGGCCCAGAG10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGCCCAGAG10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTCGCATCCCAGGG10.36231884057971014No Hit
CCCAACCGCGCCCCACGCTGTCGAACCACAGCGTCAGATACAGACCAGAC10.36231884057971014No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGAT10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGATCAGAG10.36231884057971014No Hit
CCTGTTTGATACCCGCACCTTCGCACATAAGCGTCAGTTCCGCTCCCATC10.36231884057971014No Hit
CCTGTTTGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTATAGACCAGAA10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGTACATGAGCGTCAGTGTTATCCCAGGG10.36231884057971014No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCCGTTGCGCTCCCGTC10.36231884057971014No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAG10.36231884057971014No Hit
CCCGTTTGCTCCCCTCGCTTTCGCGCCTCAGCGTCATTGTTAGTCCAGTA10.36231884057971014No Hit
ATTGTTTGATACCCGCAGCTTCGAACTTAAGCGTCTGTTACGGTCTTGTC10.36231884057971014No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTG10.36231884057971014No Hit
CCCGTTCGATACCCTCACCTTCGCGCCTAAGCGTCAGTTTCGCTCCCGTC10.36231884057971014No Hit
CCTGTTCGATACCCGCACCTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG10.36231884057971014No Hit
CCTGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTGCGCTCCCGTC10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.36231884057971014No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGTCCAGAT10.36231884057971014No Hit
CCTGTTCGATACCCGCACCTTCGCGCTTCAGCGTCAGTTGCGCTCCCGTA10.36231884057971014No Hit
CCCGTTCGATACCCTCACTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGTA10.36231884057971014No Hit
ACTGTTTGATACCCACGCTTTCGAATCTCCGTGTCAATATTATGCCAGGA10.36231884057971014No Hit
CCTGTTCGCTCCCCACGCTCTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.36231884057971014No Hit
CCCGTTCGCTCCCCTGGCTTTCGAGCCTCAGCGTCAGTTGCAGTCCAGAA10.36231884057971014No Hit
CATGTCCGCTCCCCTCGCTGTCGAGCCTCAGCGTCAGTTACTGTCCAGTG10.36231884057971014No Hit
CCTGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTATCGTCCAGAA10.36231884057971014No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACCCG50.0970.99994195
GTTTGCT250.0194.24
CCTGTTT250.0194.21
TGTTTGC250.0194.23
GCTACCC157.446004E-6194.28
TGCTACC157.446004E-6194.27
CTGTTTG250.0194.22
TTTGCTA157.446004E-6194.25
CTACCCA157.446004E-6194.29
TTGCTAC157.446004E-6194.26
CTCCCCA100.0014272812194.199989
TGCTCCC100.0014272812194.199987
GCTCCCC100.0014272812194.199988
TTTGCTC100.0014272812194.199985
TTGCTCC100.0014272812194.199986
ACGCTTT254.973623E-538.8415-19
CACGCTT254.973623E-538.8410-14
CCACGCT254.973623E-538.8410-14
CGCTTTC254.973623E-538.8415-19
CCCACGC254.973623E-538.8410-14