FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441
Sequences flagged as poor quality0
Sequence length197-201
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA4911.11111111111111No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA439.750566893424036No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA317.029478458049887No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA245.442176870748299No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA163.6281179138321997No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA153.4013605442176873No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA143.1746031746031744No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA112.494331065759637No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA112.494331065759637No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA81.8140589569160999No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA71.5873015873015872No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA61.3605442176870748No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA61.3605442176870748No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA61.3605442176870748No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA51.1337868480725624No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA40.9070294784580499No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA40.9070294784580499No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA40.9070294784580499No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA40.9070294784580499No Hit
CCGGCTGACTGACTCCGTAAGAATCTCGTATGCCGTCTTCTGCTTGAAAA40.9070294784580499RNA PCR Primer, Index 36 (96% over 28bp)
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA40.9070294784580499No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA30.6802721088435374No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.6802721088435374No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA30.6802721088435374No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA30.6802721088435374No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA30.6802721088435374No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.45351473922902497No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.45351473922902497No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA20.45351473922902497No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.45351473922902497No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA20.45351473922902497No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCTCGTA20.45351473922902497No Hit
TACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGCGTGCGTA20.45351473922902497No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA20.45351473922902497No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.45351473922902497No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA20.45351473922902497No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA20.45351473922902497No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.45351473922902497No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA20.45351473922902497No Hit
ACTTCCTACAGGTAGCGTTGACCATAATTTTGGTCGTCTGGTACGCAATC10.22675736961451248No Hit
TGATATTAATAACACTATAGACCACCGCCCCGAAGGGGACGAAAAATGGT10.22675736961451248No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.22675736961451248No Hit
TCAAGAAGTCCTTTACCAGCTTTAGCCATAGCACCAGAAACAAAACTAGG10.22675736961451248No Hit
ACCAGCACGCTCCCAAGCATTAAGCTCAGGAAATGCAGCATCAAGATAAT10.22675736961451248No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.22675736961451248No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTA10.22675736961451248No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA10.22675736961451248No Hit
CTAAAATGCAACTGGACCATCAGAAAGAGATTGCCGAGATGCAAAATGAG10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGCGCA10.22675736961451248No Hit
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGTA10.22675736961451248No Hit
TACGTAGGTTCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
TACGGAGGGTGCGAGCGTTATTCGGAATAATTGGGCGTAAAGGGCTCGCA10.22675736961451248No Hit
TACGGAAGTTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.22675736961451248No Hit
TACATAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGTGCA10.22675736961451248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTCAAGCGAGCGCA10.22675736961451248No Hit
CGCTGATTCTGCGTTTGCTGATGAACTAAGTTAACCTCAGCACTATCCTT10.22675736961451248No Hit
TACGTATGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
TGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAAC10.22675736961451248No Hit
TTCTTGGTCAGTATGCAAATTAGCATACGCAGCTTGCCGACCCATAATGT10.22675736961451248No Hit
TACGTAGGTCCCGAGCGTTGTCCGTATTTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
ACCAGAACGGAAAACATCCTTCATAGACATTTCACGCTGCGGCATGTTGC10.22675736961451248No Hit
GAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACG10.22675736961451248No Hit
CTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCG10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGAGCGTA10.22675736961451248No Hit
TACGGAAGGTCCATGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.22675736961451248No Hit
CTTCTGGTGTGGTTGATATTTTTCATGGTATTGATAAAGCTGTTGCCGAT10.22675736961451248No Hit
TATGGCGAGAAATAAAAGTCTGAATCATGATTAAACTCCTTAGCAGAAAA10.22675736961451248No Hit
TACGTAGGTGCCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.22675736961451248No Hit
CGCGGCGGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATCGGTATA10.22675736961451248No Hit
ATAAGAACGAACCATAAAAAAGCCTCCAAGATTTGGAGGCATGAAAACAT10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGGGCGTGCA10.22675736961451248No Hit
TACGTATGTCGCGAGCCTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.22675736961451248No Hit
ACCGCCCCGAAGGGGCCGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT10.22675736961451248No Hit
ACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAG10.22675736961451248No Hit
GCTTGGAAAGATTGGTGTTTTCCATAATAGACGCAACGCGAGCAGTAGAC10.22675736961451248No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.22675736961451248No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.22675736961451248No Hit
TACGTAGGGCGCGAGCCTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.22675736961451248No Hit
TCCTTCATAGAAATTTCACGCGGCGTCCAGTTGCCATACAAAACAGGGTC10.22675736961451248No Hit
TAATCTCTTTAATAACTTGATTCAGCGACACCAATCCGCGGCATTTAGTA10.22675736961451248No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.22675736961451248No Hit
GATTGAGAAAGAGTAGAAATGCCACAAGCCTCAATAGCAGGTTTAAGAGC10.22675736961451248No Hit
TACGGAAGGTCCAGTCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.22675736961451248No Hit
CACCGGCAGCTCTAGTGGTAGCAGTTTTTATTGGGCCTAAAGCGTCCGTA10.22675736961451248No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGATCGTA10.22675736961451248No Hit
TCACGAAGTCATGATTGAATCGCGAGTGGTCGGCAGATTGCGATAAACGG10.22675736961451248No Hit
CATACATATCACCATTATCGAACTCAACGCCCTGCATAAGAAAAGACAGA10.22675736961451248No Hit
ACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT10.22675736961451248No Hit
AAAACAGGGTCGCCAGCAATATCGGAATCAGTCAAAGCACCTTTAGCGTT10.22675736961451248No Hit
TACGTAGGGCGCGAGCGTTGTCCGGCATTATTGGGCGTAAAGAGCTTGTA10.22675736961451248No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGCCTA10.22675736961451248No Hit
TTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGC10.22675736961451248No Hit
ATAAAAAAGCCTCCAAGATTTGGAGGCATGAAAACATACAATTGGTTGGG10.22675736961451248No Hit
TCCGGCTGACTGACTATGCACGAATCTCGTATGCGGTCTTCTGCTTGAAA10.22675736961451248TruSeq Adapter, Index 8 (96% over 26bp)
TACGAAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.22675736961451248No Hit
ATACTCGTGATTATCTTGCTGCTGTATTTCCTGAGCTTAATGCTTGGGAG10.22675736961451248No Hit
GACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGACAA10.22675736961451248No Hit
AGTAGTTGAAATGGTAATAAGACGACCAATCTGACCAGCAAGGAAGCCAA10.22675736961451248No Hit
TACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGTA10.22675736961451248No Hit
AAACTGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGAC10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.22675736961451248No Hit
TAGGAACATTAGAGCCTTGAATGGCAGATTTAATACCAGCATCACCCATG10.22675736961451248No Hit
CCCGGCTGACTGACTCCGTAAGAATCTCGTATGCCGTTTTCTGCTTGAAA10.22675736961451248RNA PCR Primer, Index 40 (96% over 27bp)
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCATCTA10.22675736961451248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTTGGCGTAAAGCGAGCTCA10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGCGCGTA10.22675736961451248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTATTGGGTGCGCA10.22675736961451248No Hit
CTAAGTCAACCTCAGCACTAACCTTGCGAGTCATTTCTTTGATTTGGTCA10.22675736961451248No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.22675736961451248No Hit
GCAAGGTCCATATCTGACTTTTTGTTAACGTATTTAGCCACATAGATACC10.22675736961451248No Hit
CTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTT10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA10.22675736961451248No Hit
TACGGAGGGAGCTAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTA10.22675736961451248No Hit
TACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC10.22675736961451248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGTGCA10.22675736961451248No Hit
TACGGCGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAACGGGCACGCA10.22675736961451248No Hit
TACGGAAGGTCCGGGCGTTATTCGGAATTATTGGGTGTAAAGGGAGCGCA10.22675736961451248No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGGGAGCGCA10.22675736961451248No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAACAGCTTTTA10.22675736961451248No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
AGCAGCCTTATGGCCGTCAACATACATATCACCATTATCGAACTCAACGC10.22675736961451248No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA10.22675736961451248No Hit
ATAATAAGCAATGACGGCAGCAATAAACTCAACAGGAGCAGGAAAGCGAG10.22675736961451248No Hit
TCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTA10.22675736961451248No Hit
TCCGGCTGACTGACTCCGTAAGAATCTCGTATGCCGTCTTCTGCTTGAAA10.22675736961451248RNA PCR Primer, Index 40 (96% over 29bp)
TACAGAGGTTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGCA10.22675736961451248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCTCA10.22675736961451248No Hit
AACAATTCAGCGGCTTTAACCGGACGCTCGACGCCATTAATAATGTTTTC10.22675736961451248No Hit
ACCAACCAGAACGTGAAAAAGCGTCCTGCGTGTAGCGAACTGCGATGGGC10.22675736961451248No Hit
CACGGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA10.22675736961451248No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTTATTGGGTGTAAAGCGTGTGTA10.22675736961451248No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCATGCA10.22675736961451248No Hit
TGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC10.22675736961451248No Hit
TCCCAAGCATTAAGCTCAGGAAATGCAGCAGCAAGATAATCACGAGTATC10.22675736961451248No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGCGTGTA10.22675736961451248No Hit
TACGTAGTTCCCGAGCGTTGTCCTGAATTATTGGGCGTAAAGCGAGCGCA10.22675736961451248No Hit
TCCCCTTCGGGGCGGTGGTCTATAGTGTTATTAATATCAAGTTGGGGGAG10.22675736961451248No Hit
TACGGAGGTTGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCGCGCA10.22675736961451248No Hit
GCCTTCCATGATGAGACAGGCCGTTTGAATGTTGACGGGATGAACATAAT10.22675736961451248No Hit
GTACGCCGGGCATTAATGTTTATGTTGGTTTCATGGTTTGGTCTAACTTT10.22675736961451248No Hit
ACATCATAGCCAGATGCCCAGAGATTAGAGCGCATGACAAGTAAAGGACG10.22675736961451248No Hit
CTTTTTCACGTTCTGGTTTGTTGTGGCCTGTTGCTGCTAAAGGGGAGCCG10.22675736961451248No Hit
TACGTATGTCACAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGTGTA10.22675736961451248No Hit
ACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCATT10.22675736961451248No Hit
GCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAA10.22675736961451248No Hit
TCACTCCTTCTGCACGTAATTTTTGACGCACGTTTTCTTCTGCGTCAGTA10.22675736961451248No Hit
TAAACTTCTTAGACGAATCACCAGAACGGAAAACATCCTTCATAGATATT10.22675736961451248No Hit
AAACATAAATCACCTCACTTAAGTGGCTGGAGACAAATAATCTCTTTAAT10.22675736961451248No Hit
ACATGGCGCCACCAGCAAGAGCAGAAGCAATACCGCCAGCAATAGCACCA10.22675736961451248No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.22675736961451248No Hit
AATGCAATGAAGAAAACCACCATTACCAGCATTAACCGTCAAACTATCAA10.22675736961451248No Hit
TACGGAAGGTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.22675736961451248No Hit
TTCTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGC10.22675736961451248No Hit
AAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACAC10.22675736961451248No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGTGCA10.22675736961451248No Hit
CTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGTCTTCCTTAAG10.22675736961451248No Hit
ACCAAATCAAGCAACTTATCAGAAACGGCAGAAGTGCCAGCCTGCAACGT10.22675736961451248No Hit
TACGTAGGTGGCAACCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.22675736961451248No Hit

[OK]Adapter Content

Adapter graph