FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences332
Sequences flagged as poor quality0
Sequence length199-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA4413.253012048192772No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA195.72289156626506No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA185.421686746987952No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA175.120481927710843No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA144.216867469879518No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA103.0120481927710845No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA92.710843373493976No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA82.4096385542168677No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA82.4096385542168677No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA72.108433734939759No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA72.108433734939759No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA61.8072289156626504No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA51.5060240963855422No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA51.5060240963855422No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA51.5060240963855422No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA41.2048192771084338No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA41.2048192771084338No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA41.2048192771084338No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA41.2048192771084338No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA30.9036144578313252No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.9036144578313252No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA30.9036144578313252No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA30.9036144578313252No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.9036144578313252No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA30.9036144578313252No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.6024096385542169No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.6024096385542169No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.6024096385542169No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.6024096385542169No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA20.6024096385542169No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.6024096385542169No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA20.6024096385542169No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA20.6024096385542169No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA20.6024096385542169No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA20.6024096385542169No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA20.6024096385542169No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA20.6024096385542169No Hit
TACGTAGGGTGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA10.30120481927710846No Hit
TACATAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
ATAGAAACCAACAGCCATATAACTGGTAGCTTTAAGCGGCTCACCTTTAG10.30120481927710846No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.30120481927710846No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGGGTGCGTA10.30120481927710846No Hit
TACGAAGTGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA10.30120481927710846No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGGGTAAAGGGAGCGCA10.30120481927710846No Hit
TACGTAGGTCCCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGCA10.30120481927710846No Hit
GCTGAATTGTTCGCGTTTACCTTGTGTGTACGCGCAGGAAACACTGACGT10.30120481927710846No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGCGCA10.30120481927710846No Hit
TACGTATGGCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGATCGTA10.30120481927710846No Hit
TACGTAGGTCCCGAGTGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.30120481927710846No Hit
TGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAACTTTTTTGCCTGTT10.30120481927710846No Hit
ACTTCTCAGTAACAGATACAAACTCATCCCGAACGTCAGAAGCCGCCTTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGCTTGTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTAGTGGGCGTAAAGCGAGCGCA10.30120481927710846No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.30120481927710846No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
AGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACC10.30120481927710846No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGAATGTA10.30120481927710846No Hit
TACGGAGGGTGCAAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGCA10.30120481927710846No Hit
CGCAATGGAGAAAGACGGAGAGCGCCAACGGCGTCCATCTCGAAGGAGTC10.30120481927710846No Hit
TACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGCGTGCGTA10.30120481927710846No Hit
TACGGAGGTTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGTA10.30120481927710846No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGCGTA10.30120481927710846No Hit
CGCAAGAGTAAACATAGTGCCATGCTCAGGAACAAAGAAACGCGGCACAG10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTTATTGGGCTTAAAGGGTTCGTA10.30120481927710846No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.30120481927710846No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.30120481927710846No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTA10.30120481927710846No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGTA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.30120481927710846No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGATCGTA10.30120481927710846No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTATAGGGCGCGCA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGTA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGTA10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGTAGGTGCCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.30120481927710846No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.30120481927710846No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.30120481927710846No Hit
GAAGAAGACTCAAAGCGAACCAAATAGGTAAAAAATTTAGGGTCGGCATC10.30120481927710846No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGCA10.30120481927710846No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCTTGTA10.30120481927710846No Hit
TACGTCGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.30120481927710846No Hit
TACGTATGGCGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGTGCTTGTG10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA10.30120481927710846No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGTAGGTCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.30120481927710846No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGCGCTCGCA10.30120481927710846No Hit
TAACGCAGGAATTACTACTGCTTGTTTACGAATTAAATCTAAGTGGACTG10.30120481927710846No Hit
TACGTAGGTGGCAAGCTTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.30120481927710846No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGTGTA10.30120481927710846No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTTGGCGTAAAGCGAGCGCA10.30120481927710846No Hit
TTGTCCAGTTGCATTTTAGTAAGCTCTTTTTGATTCTCAAATCCGGCGTC10.30120481927710846No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTCGTA10.30120481927710846No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGCTTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA10.30120481927710846No Hit
TACATAGGGGGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTA10.30120481927710846No Hit
ACATAAACATTATTGCCCGGCGTACGGGGAAGGACGTCAATAGTCTCACA10.30120481927710846No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGTTTGTA10.30120481927710846No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGAGCGTA10.30120481927710846No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.30120481927710846No Hit
ATCATAGGCAGTCGGGAGGGTAGTTGGAACCGAAGAAGACTCAAAGCGAA10.30120481927710846No Hit
TACGTAGGTTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.30120481927710846No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGAGCGCA10.30120481927710846No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.30120481927710846No Hit
CTCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA10.30120481927710846No Hit
TACGTATGTCACGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA10.30120481927710846No Hit
CACCACGTCCAACCACATCAAGCAACTTATCAGAAACGGCAGAAGTGCCA10.30120481927710846No Hit
TACAGAGGTCTCAAGCGTTGTTCGTAATCACTGGGCGTAAAGCGTTCGTA10.30120481927710846No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATCACTGGGCGTAAAGGGCACGCA10.30120481927710846No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA10.30120481927710846No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.30120481927710846No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCTTAAAGCGAGCGTA10.30120481927710846No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGAGCATCTA10.30120481927710846No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGTA10.30120481927710846No Hit
GCCTGCAACGTACCTTCAAGAAGTCCTTTACCAGCTTTATCCATAGCACC10.30120481927710846No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA10.30120481927710846No Hit
TACGTAGGTCCCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.30120481927710846No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCAG108.247026E-5389.0195
TGGCAAG100.0016430537194.59
GGTCCCG100.0016430537194.57
ACGTAGG204.6373316E-8194.52
AGGTGGC100.0016430537194.56
GTCCCGA100.0016430537194.58
TACGTAG204.6373316E-8194.51
AGGTCCC100.0016430537194.56
GTAGGTC100.0016430537194.54
GGTGGCA100.0016430537194.57
GTGGCAA100.0016430537194.58
TCCCGAG100.0016430537194.59
TAGGTCC100.0016430537194.55
CGTAGGT303.5164885E-7129.666673
TAGCGGT255.5096323E-538.9150-154
GGCGTAA255.5096323E-538.930-34
TGTAGCG255.5096323E-538.9150-154
GAATTCC255.5096323E-538.9140-144
GAACACC255.5096323E-538.9180-184
TGGGCGT255.5096323E-538.930-34