FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences588
Sequences flagged as poor quality0
Sequence length198-201
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG17429.591836734693878No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAATCTTGACCCAGGG559.35374149659864No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG244.081632653061225No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTATCGGCCCAGAG233.9115646258503403No Hit
CCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCA223.741496598639456No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTAATGGTCCAGTT193.231292517006803No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATGATGCCAGGG193.231292517006803No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGACCAGAA193.231292517006803No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGGCCAGAG172.891156462585034No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTG172.891156462585034No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTATCGGGCCAGTG122.0408163265306123No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG122.0408163265306123No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTATGCCAGGA111.870748299319728No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG81.3605442176870748No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG61.0204081632653061No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG50.8503401360544218No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTTTTGTG50.8503401360544218No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA50.8503401360544218No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG40.6802721088435374No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAA40.6802721088435374No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG30.5102040816326531No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAATCTTGACCCAGGG30.5102040816326531No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGAT30.5102040816326531No Hit
CCTGTTTGATCCCCGCACTTTCGCGCCTCAGTGTCAGTTACAGTTTTGTG20.3401360544217687No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATCATGCCAGGG20.3401360544217687No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC20.3401360544217687No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTGCAGCTTAGCA20.3401360544217687No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATGATGCCAGTG20.3401360544217687No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC20.3401360544217687No Hit
CCCGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTATCGGCCCAGAG20.3401360544217687No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATGAGCGTCAGTACATTCCCAAGG20.3401360544217687No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTATCGTCCAGTA20.3401360544217687No Hit
CCTGTTTGATACCCACACTTTCGCGCCTCAATGTCAGTTGCAGCCTAGCA10.17006802721088435No Hit
CCTGTTCGCTACCCATGCTTTCGCGTCTCAGCGTCAGTTACAGCCCAGAC10.17006802721088435No Hit
CCTGTTTGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTCCGTCCAGAA10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCTTCAGTGTCAGTTACTGGCCAAAG10.17006802721088435No Hit
CCTGTTTGATCCCCAGGCTTTCGCACCTCAGCGTCAGTTATCGTCCAGAA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGCGCATCAGCGTCAGTAATGGCTTGGCA10.17006802721088435No Hit
CCTGTTCGATCCCCGCACTTTCGAGCCTAAGCGTCAGTTACAGTTTTGTG10.17006802721088435No Hit
CCTGTTTGCTACCCACCCTTTCGAGCTTCAGCGTCAGTTACGCTCCAGTC10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGTC10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTAAGTGTCAGTTACAGTTTTGTG10.17006802721088435No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGCGTCAGTATGTTCCCAGGG10.17006802721088435No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCCGTATGATGCCAGGG10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTTTG10.17006802721088435No Hit
CCTGTTTGCTACCCACACTTTCGAACCTCAGCGTCAGTTGGCGCCCAGTA10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATCAGCGTCAGTTTCAGACCAGAA10.17006802721088435No Hit
CCTGTTCGATACCCGCACCTTCGTGCTTCAGCGTCAGTTGTGCTCTCGTC10.17006802721088435No Hit
CCTGTTCGCTCCCCTGGCTTTCGCACCTCAGCGTCAGTTTTCGTCCAGTG10.17006802721088435No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGCGCTCCAGTG10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTACCTTCCCAGAG10.17006802721088435No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCATTTGCGCTCCCGTC10.17006802721088435No Hit
CCCATTCGCGCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCA10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTCTTGTG10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTTGTG10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGATTCTCAGCGTCAGTTACAGCCCAGAG10.17006802721088435No Hit
CCTGTTCTCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGTCCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGTGTCTCAGCATCAGTTGCCGTCCAGTA10.17006802721088435No Hit
CCTGTTCGATCCCCTGGCTTTCGTGCCTCAGCGTCAGTTACAGTTTATAC10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCGTCGTCCAGCG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACTGTCCAGCG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACACACCAGAG10.17006802721088435No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTGTAGCTTAGCA10.17006802721088435No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC10.17006802721088435No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.17006802721088435No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGTCCAGAG10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTGCAGTCAAGTG10.17006802721088435No Hit
CCTGTTCGCTACCCGCACCTTCGATCTTCAGCGTCAGTTGCGCTCCCGTC10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACAGCCCAGTA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGGA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.17006802721088435No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGTGTCAGTTGCAGCTTAGCA10.17006802721088435No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCCCGTG10.17006802721088435No Hit
CCTGTTCTCTCCCCCCGCTTTCGAACCTCCGCGTCATTTACATCCCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTGTTATCCCAGGG10.17006802721088435No Hit
CCTGTTCGCTCCCCTCGCTTTCGCTCCTCAGCGTCAGTTTTCGTCCAGAA10.17006802721088435No Hit
CCCGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.17006802721088435No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGTT10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGCACCTCAGCGTCAGTTACCGACCAGAA10.17006802721088435No Hit
CCCGTTTGCTCCCCAGGCTTTCGAGCCTCAGCGTCAGTTATAGTCCAGAG10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGCCCAGTA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGAGCCTCAACGTCAGTTATTGTCCAGTA10.17006802721088435No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCTAGTA10.17006802721088435No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGCGTCAGTTGCGGCCTAGCA10.17006802721088435No Hit
CCTGTTTGATACCCGCACCTTCGCGCTTCCGCGTCAGTTTTGCTCCCGTA10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAATCTTGACCCAGTG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTGCAGGCCAAAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTCCTCGCCCAGGG10.17006802721088435No Hit
CCTGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTACCGACCAGAG10.17006802721088435No Hit
CCTGTTTGCTACCCGCACTTTCGAGCTTGAGCGTCAGTTTTGCTCCAGTA10.17006802721088435No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAATCCAGTA10.17006802721088435No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAGTCCAGTA10.17006802721088435No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCAAGCCTCAGTGTCAGTTACAGGCCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCTCGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA10.17006802721088435No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGCGTCAGTATTTTGCCAGAT10.17006802721088435No Hit
CCTGTTCGATCCCCACGCTTTCGCACATCAGCGTCAGTTACACTCCAGAA10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCACCGTCAGTTATCGTCCAGTA10.17006802721088435No Hit
CCTGTTTGCTACCCATGCTTTCGCTCTTCAGCGTCAGTAACTGCCCAGTA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAG10.17006802721088435No Hit
CCTGTTCGCTACCCACGCTTTCGCTCCTGAACGTCAGTTCTATCCCAGTC10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGCACCTCAGCGTCAGTTACAGCCCAGAC10.17006802721088435No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCGGTCTTCGCCCAGAG10.17006802721088435No Hit
CCCGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTTCGACCAGAA10.17006802721088435No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTAGCA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTAACGGCCCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATCAGCGTCAGTTATGGTTTGGCC10.17006802721088435No Hit
CCCGTTTGCTCCCCTCGCTTTCGCACCTCAGCGTCAGTTTTCGTCCAGAA10.17006802721088435No Hit
CCTGTTTGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTAACTGCCCAGTA10.17006802721088435No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGTGCTCCAGAC10.17006802721088435No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATGATTCCAGGG10.17006802721088435No Hit
CCTGTTTGCTACCCATGCTTTCGCTCCTCAGCGTCAGTAACTGCCCAGTA10.17006802721088435No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGTCCAGAC10.17006802721088435No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGTGCTCCCGTA10.17006802721088435No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGCCCAGAC10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCCTTCGCGCCTCAACGTCAGTTATCGTCCAGTA10.17006802721088435No Hit
CCCGTTCGCTACCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTGAGCGTCAGTATCCGTCCAGGG10.17006802721088435No Hit
CCTGTTTGCTCCCCCGGCTTTCGCACTTCAGCGTCAGTTACCGTCCAGTG10.17006802721088435No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTTACAGACCAGAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.17006802721088435No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGTCCAGAT10.17006802721088435No Hit
CCCGTTCGATACCCTGACTTTCGCGCCTCAGCGTCAGTTTTCGTCTAGAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGAG10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACGGACCAGAG10.17006802721088435No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGGCCAAAA10.17006802721088435No Hit
CCTGTTCGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTACAGCCCAGAG10.17006802721088435No Hit
CCCGTTCGCTCCCCTGGCTTTCGAGCCTCAGCGTCAGTTGCAGTCCAGAA10.17006802721088435No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTTGTGGCTTAGTA10.17006802721088435No Hit

[OK]Adapter Content

Adapter graph