FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533
Sequences flagged as poor quality0
Sequence length199-201
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA11721.951219512195124No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA519.568480300187618No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA387.129455909943714No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA275.065666041275797No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA264.878048780487805No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA213.9399624765478425No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTA193.564727954971857No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA163.0018761726078798No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA142.6266416510318953No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA122.25140712945591No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA122.25140712945591No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA91.6885553470919326No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA71.3133208255159476No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA71.3133208255159476No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA71.3133208255159476No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA71.3133208255159476No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA50.9380863039399625No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.9380863039399625No Hit
TACGGAGGGAGCTAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTA50.9380863039399625No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA50.9380863039399625No Hit
GACGTAGGGTCCGAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCGCGTA40.7504690431519699No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA40.7504690431519699No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.7504690431519699No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA40.7504690431519699No Hit
GACGAAGGCTGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA40.7504690431519699No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA30.5628517823639775No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA30.5628517823639775No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA30.5628517823639775No Hit
TACGTAGGGCGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA20.37523452157598497No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA20.37523452157598497No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA20.37523452157598497No Hit
TACGTAGGGCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA20.37523452157598497No Hit
GACGAAGGATGCAAGCGTCATCCGGATTCATTGGGTTTAAAGGGAGCGTA20.37523452157598497No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA20.37523452157598497No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA20.37523452157598497No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA20.37523452157598497No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGCGCATCTA10.18761726078799248No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.18761726078799248No Hit
TACGGCAGGCCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.18761726078799248No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
TTCGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA10.18761726078799248No Hit
GACGAAGGTTGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.18761726078799248No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.18761726078799248No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGCGTGTA10.18761726078799248No Hit
TACGGAAGGTCCTGGTGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGGAAGGCCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGCGTA10.18761726078799248No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.18761726078799248No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGCATGCA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTA10.18761726078799248No Hit
GACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTA10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCTCGCA10.18761726078799248No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGCGTA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.18761726078799248No Hit
TACGTAGTGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.18761726078799248No Hit
AATGGGAAGCCTTCAAGAAGGTGATAAGCAGGAGAAACATACGAAGGCGC10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGTGTA10.18761726078799248No Hit
AACGAAGGACGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTGTTCGGATTTATTGGGCGTAAAGCGAGCGCA10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA10.18761726078799248No Hit
TACGTAGGTGGCAATCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
TACGTAGTGTGCGAGCGTTATCCGGAATTTTTGGGCGTAAAGAGCTCGTA10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTTGTA10.18761726078799248No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGAGCGCA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCTTAAAGCGCGCGCA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA10.18761726078799248No Hit
TACGTAGGTCGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCGCGCA10.18761726078799248No Hit
TACGTAGGTTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.18761726078799248No Hit
TACAGAGGGCGCGAGCGTTAATCGGAATTATTGGGCGTAAAGCGAGTGTA10.18761726078799248No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCC10.18761726078799248No Hit
ATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCC10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCG10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA10.18761726078799248No Hit
TACGTATGGTGCAAGCGTTATCCGGAATTACTGGGCGTAAAGGGCGCGCA10.18761726078799248No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATGATTGGGCGTAAAGCGCGCGCA10.18761726078799248No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCGTCTA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.18761726078799248No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGTGCA10.18761726078799248No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATCATTGGGTGTAAAGGGCGCGCG10.18761726078799248No Hit
TACGTAAGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGTA10.18761726078799248No Hit
TACGTAGGTCCTGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.18761726078799248No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA10.18761726078799248No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCGTCTA10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA10.18761726078799248No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.18761726078799248No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.18761726078799248No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.18761726078799248No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGCTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCGCGCA10.18761726078799248No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTACGTA10.18761726078799248No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACCGGGCGTAAAGGGAGCGTA10.18761726078799248No Hit
TACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.18761726078799248No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGTGTAAAGGGAGCGCA10.18761726078799248No Hit
TACGGATGTCGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGCACGTA10.18761726078799248No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGCA10.18761726078799248No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCGG103.549007E-4324.33334195
AGGTGGC305.456968E-12194.66
TGGCAAG201.5020487E-7194.599999
ACGTAGG400.0194.599992
TACGTAG400.0194.599991
GGTGGCA201.5020487E-7194.599997
GTGGCAA201.5020487E-7194.599998
TGGCGAG100.0021228478194.599999
CGTAGGT400.0170.2753
GTAGGTG351.4551915E-11166.799994
TAGGTGG351.4551915E-11166.799995
GTGGCGA451.548935E-643.2444468
GTAGATA303.859872E-638.920002165-169
GGAGAGG256.79888E-538.920002125-129
TTGTCCG256.79888E-538.92000215-19
CCGGATT303.859872E-638.92000220-24
CGTTATC256.79888E-538.92000215-19
CCAGTGG256.79888E-538.920002185-189
TGTCCGG256.79888E-538.92000215-19
GTCCGGA256.79888E-538.92000220-24