FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences292
Sequences flagged as poor quality0
Sequence length199-201
%GC52

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG4816.43835616438356No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTATGCCAGGA4816.43835616438356No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG134.4520547945205475No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTG82.73972602739726No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA82.73972602739726No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG51.7123287671232876No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG51.7123287671232876No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG41.36986301369863No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTGTGCCAGGA41.36986301369863No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC31.0273972602739725No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTTAGTGTCAATATTATGCCAGGA20.684931506849315No Hit
CCTGTTCGCTCCCCCGGCTTTCGCACTTCAGCGTCAGTTACCGTCCAGTG20.684931506849315No Hit
CCTGTTTGCTACCCACGCTTTCGAGCATGAACGTCAGTGTTATCCCAGGA20.684931506849315No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC20.684931506849315No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAACGTCAGTTGTCGTCCAGTA20.684931506849315No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG20.684931506849315No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGTG20.684931506849315No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTGTTATCCCAGGG20.684931506849315No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTTAGCGTCAGTATCTGTCCAGTA20.684931506849315No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC20.684931506849315No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGGCCAGAG20.684931506849315No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGTGCTCCCGTA20.684931506849315No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA20.684931506849315No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAG10.3424657534246575No Hit
CCTGTTCGATACCCACGCTTTCGAGCCTCAGCGTCAGTCGCGAGTCGGTA10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCATGAGCGTCAGTAACGGCCCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTCCGTCCAGTA10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTCGGTCCAGAC10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCCTTCGCGCCTCAACGTCAGTTTTCGTCCAGCA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAGTTCCTTCCCAGCG10.3424657534246575No Hit
CCTGTTTGCGCCCCACGCTTTCGTGCATGAGGGTTAGTGTTATCTTTGGG10.3424657534246575No Hit
CATGTTAAGTAGTCGCGCTTTGACGCGGCATCGTATGTTGTTTCTTAGTA10.3424657534246575No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGTGCTCCCGTC10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGTG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACCGTCCAGCG10.3424657534246575No Hit
CCTGTTTGCTACCCTCGCTTTCGAATCTCAGTGTCAATATTGTGCCAGGA10.3424657534246575No Hit
CCTGTTTGCGCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGTCCAGCG10.3424657534246575No Hit
CCTGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTACCGTCCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACCGACCAGTG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCACGCCTTAGCGTCAGTTGCGTTCCAGCA10.3424657534246575No Hit
CCTGTTTGCTACCCACACTTTCGCGCCTCAGCGTCAGTTGGTGCCCAGTC10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTGCCGTCCAGTT10.3424657534246575No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGCGCTCCAGTG10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGTGCCTCAGCGTCAGTTACAGCCCAGTA10.3424657534246575No Hit
CCTATTTGCTCCCCACACTTTCGCGCCTCCTCGTTAGTTATTGCCCCGTC10.3424657534246575No Hit
GCGGTTTGCTACCCACGCGTTCGAAACGCAGTGTCAATAGTATGCCAGGA10.3424657534246575No Hit
ACTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTATGAGGCCAGGG10.3424657534246575No Hit
CCTGTTTGCTCCCCCCGCTTTCGCGCCTCAGTGTCAGTTACAGTCCAAAC10.3424657534246575No Hit
CCTGTTTGATCCCCCCGCTTTCGTGCTTCAGCGTCCGTCATGGTTTAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACTTGAGCGTCAGTACATTTCCCATC10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACTAGCCAGTG10.3424657534246575No Hit
CCTGTTTTCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACTGCCCAGTG10.3424657534246575No Hit
CCTGTTCGCTCCCCCAGCTTTCGTGCCTCAGCGTCGGTCTCGGCCCAGAG10.3424657534246575No Hit
CCTGTTTGATCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGTCCAGTA10.3424657534246575No Hit
CCTGTTTGATCCCCACGCTTTCGCACTTCAGCGTCAGTTACAGACCAGAA10.3424657534246575No Hit
CCTGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTG10.3424657534246575No Hit
CCTGTTTGCTCCCCACACTTTCGCGCCTCAGCGTCAGTTACAGTCCAGTT10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGCATCTCAGTGTCAATATTATGCCAGGA10.3424657534246575No Hit
CCTGTTTGATACCCGTGCCTTCGTACCTCAGCGTCAGTTTTGCTCCCGTC10.3424657534246575No Hit
CCTGTTCGCTCCCCGCGCTTTCGAGCCTCAGCGTCAGTTACGGACCAGAG10.3424657534246575No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGTA10.3424657534246575No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.3424657534246575No Hit
CCTGTTCGCTACCCATGCTTTCGAGTCTCAGCGTCAGTTGCAGACCAGGT10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTTTTATCCCAGGG10.3424657534246575No Hit
CCTGTTCGCTCCCCCCGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGA10.3424657534246575No Hit
CCTGTTCGATACCCGCGCTTTCGAGCTTCAGCGTCAGTTACGCTCCCGCC10.3424657534246575No Hit
CCTGTTTGCTCCCCTCGCTTTCGCGCCTGAGCGTCAGTTTCCGTCCAGAA10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.3424657534246575No Hit
CCTGTTTGATCCCCTCGCTTTCGCACTTCAGCGTCAGTTACAGTCCAGTG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATGAGCGTCAGTACCTTCCCAGGG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCCGCGTCAGTTACGGCCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCTCGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG10.3424657534246575No Hit
CCTGTTTGATCCCCACGCCTTCGAGCATCAGCGTCAGTAGTGGCTTTGTC10.3424657534246575No Hit
AAATATCCTTTACAGTAGCGCCAATATGAGAAGAGCCATACCGCTGATTC10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGCACATGAGCGTCAGTACTTTCCCAAGG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAGCGTCAGTTGTCGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTACCCTCGCTTTCGCGCATGAGCGTCAGTTTTATCCCAGGA10.3424657534246575No Hit
CCTGTTTTATACCCCCACTTTCGAGCCTCAGTGTCAGTTGCATCTTATCA10.3424657534246575No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.3424657534246575No Hit
CCTGTTTGATCCCCACGCTTTCGTGCTTCAGCGTCAGTAATGGCTTCGTC10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCCCGCTTTCGTGCCTCAGCGTCAGTTACAGTCCAGAG10.3424657534246575No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAATGTCTGTTCCAGTCTAGTA10.3424657534246575No Hit
CCAATTAGATCCCCTCGCTTGCGCGCCTCGGCGTCAGTTACCTTCCCGCC10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGTCCAGGA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGTGTCAGTATGATGCCAGGG10.3424657534246575No Hit
CCTGTTTGCTCCCCTAGCTTTCGTGCCTCAGCGTCAGTTACGGCCCAGCA10.3424657534246575No Hit
CCTGTTCGATCCCCGCGCCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTACAGTCCAGTA10.3424657534246575No Hit
TGTTTCAATTTTAAACGAGCGTGGATTACTATCTGCGTCCGATGCTGTTC10.3424657534246575No Hit
CCTGTTTGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG10.3424657534246575No Hit
CCTGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTCAGTCCAGAA10.3424657534246575No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTACTTTCTTGGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG10.3424657534246575No Hit
CCTGTTTGATCCCCCCGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGTACCTCAGCGTCAGTTATAGGCCAGAT10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGTGCCTCAGTGTCAGTTACAGTCCAGAA10.3424657534246575No Hit
CCTGTTTGCGACCCACGCTTTCGAATCTCAGGGTCAATATTATGCCAGGA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCCGCA10.3424657534246575No Hit
CCTGTTTGCTCCCCTCGCTTTCGAGCCTGGGCGTCAGTGTTATCCCATGA10.3424657534246575No Hit
CCTGTTGGATACCCACACTTTCGAGCCTCAGCGTCAGTTACAGACCGGAC10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAG10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACACTCCAGAG10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTGAACGTCAGTGTTATCCCAGGA10.3424657534246575No Hit
CCTGTTTGATTCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCTAGCG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTAACAGCCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA10.3424657534246575No Hit
CCTGTTCGCTCCCCGCACCTTCGAGCTTCAGCGTCAGTTACCCTCCCGTA10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTGAGTGTCAGTATTTTGCCAGGG10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTACAGACCAGCG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAACGTCAGTTACCGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTTCAAGCCAGAG10.3424657534246575No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTCCGTCCAGAA10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTGAGCGTCAGTGTTATCCCAGGA10.3424657534246575No Hit
CCTTTTTGCTCCCCACACCTTCTCGCCTCAACGTCAGTTCTCGTCCAGTA10.3424657534246575No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAA10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGATCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATGAGCGTCAGTACATTCCCAAGG10.3424657534246575No Hit
CCCGTTCGCTCCCCTTGCTTTCGCGCCTCAGCGTCAGTTCTCGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATCAGCGTCAGTTACAGTCCAGTA10.3424657534246575No Hit
CCTGTTTGCTACCCGCGCTTTCGAGTCTCAGTGTCAATATTGTTCCAGTA10.3424657534246575No Hit
CCTGTTCGATCCCCTCACTTTCGTGCCTCAGCGTCAGTTGCGGTCCGGTG10.3424657534246575No Hit
CCTGTTTGCTCCCCTCGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAAGTTAGAG10.3424657534246575No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCCGCGTCAGTTACAGCCCAGAG10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGCG10.3424657534246575No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCCGAG10.3424657534246575No Hit
CCTGTTCGATTCCCTCGCCTTCGCGCTTAATCGTCAGTTGCGCTCCCGTC10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTGCGAATCTCAGTGTCAATATTATGCTAGGA10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA10.3424657534246575No Hit
CCCGTTCGCTACCCTGGCTTTCGCGCCTCAGCGTCAGTCTCCGTCCAGAA10.3424657534246575No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGTCCAGAT10.3424657534246575No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGGGTCAATATTATGCCAGGA10.3424657534246575No Hit
CCGGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTATAGACCAGAG10.3424657534246575No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGCA10.3424657534246575No Hit
CCTGTTTGATACCCGCACTTTCGAGCCTCAGCGTCAGTAGCGCTCCAGCA10.3424657534246575No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)