FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences519
Sequences flagged as poor quality0
Sequence length198-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA9718.689788053949904No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTA8516.377649325626205No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA428.092485549132949No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA336.358381502890173No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG183.4682080924855487No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA183.4682080924855487No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA122.312138728323699No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA112.119460500963391No Hit
GACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA101.9267822736030826No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA101.9267822736030826No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA91.7341040462427744No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA91.7341040462427744No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA81.5414258188824663No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA81.5414258188824663No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA71.348747591522158No Hit
TACGGAGGATCCAAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTA61.1560693641618496No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA50.9633911368015413No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA50.9633911368015413No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.7707129094412332No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA40.7707129094412332No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA40.7707129094412332No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA30.5780346820809248No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.5780346820809248No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA30.5780346820809248No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA30.5780346820809248No Hit
TACGGAGGGAGCTAGCGTTATTCGGAATTACTGGGCGTAAAGCGCACGTA30.5780346820809248No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCGCGCA30.5780346820809248No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA30.5780346820809248No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA30.5780346820809248No Hit
GACGAAGGATGCTAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA20.3853564547206166No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA20.3853564547206166No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.3853564547206166No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA20.3853564547206166No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA20.3853564547206166No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.3853564547206166No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA20.3853564547206166No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA20.3853564547206166No Hit
AAACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGC10.1926782273603083No Hit
CAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTG10.1926782273603083No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAATGGAGCGTA10.1926782273603083No Hit
TATCGCACTCAACGCCCTGCATACGAAAATACAGAATCTCTTCCAAGAGC10.1926782273603083No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGCGCATCCA10.1926782273603083No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.1926782273603083No Hit
GTACGGGGAAGGACGTCAATAGTCACACAGTCCTTGACGGTATAATAACC10.1926782273603083No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.1926782273603083No Hit
TACGTATGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGAGCGTA10.1926782273603083No Hit
TTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAACATTCGAC10.1926782273603083No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGTGCACGCA10.1926782273603083No Hit
TACATATGGGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.1926782273603083No Hit
GACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGCGTAAGGAGCTCGTA10.1926782273603083No Hit
TACGTAGGGCGCGGGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTTGTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.1926782273603083No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGTGTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTGTCCGTATTTATTGGGCGTAAAGCGAGCGCA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTATCCGGCTTTATTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.1926782273603083No Hit
TACGGAAGGTCCGGGCGTTATCCGGAATTATTGGGTTTAAAGGGAGCGCA10.1926782273603083No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGGA10.1926782273603083No Hit
GACGAAGGATGCAAGCGTTATCCGGCTTCATTGGGTTTAAAGGGAGCGTA10.1926782273603083No Hit
GTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAAC10.1926782273603083No Hit
TTACCAGCTTTAGCCATAGCACCAGAAACAAAACTAGGGACGGCCTCATC10.1926782273603083No Hit
TACGGAGGGGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA10.1926782273603083No Hit
GACGTAGGTAGCGAGCGTTGTCCGGCATTACTGGGCGTAAAGAGCTCGTA10.1926782273603083No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.1926782273603083No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.1926782273603083No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTA10.1926782273603083No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTTGGCGTAAAGCGAGCGCA10.1926782273603083No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTATTGGGCGTAAAGGGTGCGCA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCTCGTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCTTAAAGCGAGTGTA10.1926782273603083No Hit
TACGTAGGGTGCAAGCGTTAATCGGATTTATTGGGCGTAAAGCGTGCGCA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCAGGCATTATTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.1926782273603083No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGAA10.1926782273603083No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGCATCTA10.1926782273603083No Hit
TACGGAGGATCCAAGCGTTATCCGGAATTATTGGGCTTAAAGGGTCCGTA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGTA10.1926782273603083No Hit
CGTCACACAGTCCTTGACGGTATAATACCCACCATCATGGCGACCATCCA10.1926782273603083No Hit
GCTTTAGCCATAGCACCAGAAACAAAACTAGGGACGGCCTCATCAGGTTT10.1926782273603083No Hit
CATTAGCCTTGCGACCCTCGGCAGCAAGAACCATACGACCAATATCACGA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA10.1926782273603083No Hit
ATAACCAGTAGTGTTAACAGTCGGGAGAGGAGTGGCATTAACACCATCCT10.1926782273603083No Hit
TACGTAGGTTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCCGGTCTTATTGGGCATAAAGCGCGTGCC10.1926782273603083No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAGAGGGAGCGCA10.1926782273603083No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTATTGGGCGTAAAGCGAGCGCA10.1926782273603083No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.1926782273603083No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.1926782273603083No Hit
TACGGAGGATGCGAGCGTTATCCGGCTTTATTGGGTTTAAAGGGTGCGTA10.1926782273603083No Hit
TACGTATGTCTCAAGCTTTCTCCGGAATTATTGGGCATAAAGGGCATCTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGTGCA10.1926782273603083No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGCGTA10.1926782273603083No Hit
CAGTAGGCGGAAAACGAACAAGCGCAAGAGTAAACATAGTGCCATGCTCA10.1926782273603083No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCATAAAGGGAGCGTA10.1926782273603083No Hit
TCCGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.1926782273603083No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGTA10.1926782273603083No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.1926782273603083No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTATAGGGAGCGTA10.1926782273603083No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCCTTGGGTTTAAAGGGAGCGTA10.1926782273603083No Hit
GACGAAGGATGCAAGCGTTATCCGGATTTATTGGGCTTAAAGGGCGCGTA10.1926782273603083No Hit
TACGGAGGGTGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.1926782273603083No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGTGTA10.1926782273603083No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGCTTGTA10.1926782273603083No Hit
TACGTAGGCGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA10.1926782273603083No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCGCGTA10.1926782273603083No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA10.1926782273603083No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAAGGCA155.99818E-4259.33334195
AGGGTGC151.9329867E-5194.56
CGTAGGT350.0194.53
TGGCAAG201.505905E-7194.499989
TACAGAG100.002126118194.499981
GGTCCCG100.002126118194.499987
AGAGGGT100.002126118194.499984
ACGTAGG400.0194.499982
GTCCCGA100.002126118194.499988
TACGTAG400.0194.499981
AGGTCCC100.002126118194.499986
GTAGGTC100.002126118194.499984
GGTGGCA201.505905E-7194.499987
GTGGCAA201.505905E-7194.499988
TCCCGAG100.002126118194.499989
GTGCGAG100.002126118194.499989
GAGGGTG100.002126118194.499985
GGGTGCG100.002126118194.499987
GGTGCGA100.002126118194.499988
TAGGTCC100.002126118194.499985