FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences856
Sequences flagged as poor quality0
Sequence length200-201
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA11313.200934579439252No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA9911.565420560747663No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA9811.448598130841122No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTA596.892523364485981No Hit
TACGTAGGGTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA333.8551401869158877No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA283.2710280373831773No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA273.1542056074766354No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA232.6869158878504673No Hit
TACAGAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTA202.336448598130841No Hit
GACGAAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGAGTGTA202.336448598130841No Hit
GACGAACCGTGCGAACGTTGTTCGGAATCACTGGGCTTAAAGGGCGCGTA192.219626168224299No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA182.102803738317757No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA182.102803738317757No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA182.102803738317757No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGCGCGTA171.9859813084112148No Hit
TACAGAGGTGGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGGGCGCGTA171.9859813084112148No Hit
TACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA161.8691588785046727No Hit
TACGGGGGGGACAAGCGTTATTCTTCATAACTGGGCGTAAAGGGTGTGTA161.8691588785046727No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGCA141.6355140186915886No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA131.5186915887850467No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA131.5186915887850467No Hit
GACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA111.2850467289719625No Hit
TACGTAGGTGGCAAGTGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA91.0514018691588785No Hit
TACAGAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGGGTGCGTA80.9345794392523363No Hit
TACAGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGTGTA70.8177570093457943No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA70.8177570093457943No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA60.7009345794392523No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA50.5841121495327103No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA50.5841121495327103No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA50.5841121495327103No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA50.5841121495327103No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA40.46728971962616817No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA40.46728971962616817No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA40.46728971962616817No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA40.46728971962616817No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA40.46728971962616817No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA30.35046728971962615No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA20.23364485981308408No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA20.23364485981308408No Hit
GACGAAGGATGCATGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA20.23364485981308408No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGCGTAAAGCGCACGTAG20.23364485981308408No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.23364485981308408No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATCACTGGGCGTAAAGGGCACGCA20.23364485981308408No Hit
TACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA20.23364485981308408No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCGCGCA10.11682242990654204No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGCGCA10.11682242990654204No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTACAGCGCTCGTA10.11682242990654204No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.11682242990654204No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGAGAGCGCA10.11682242990654204No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGAGCGTA10.11682242990654204No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.11682242990654204No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGCTTAAAGGGTGCGCA10.11682242990654204No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.11682242990654204No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.11682242990654204No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.11682242990654204No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGTGTA10.11682242990654204No Hit
TACGGATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.11682242990654204No Hit
GACGTAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGAGCGTA10.11682242990654204No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGCA10.11682242990654204No Hit
TACGTATGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.11682242990654204No Hit
GACGAAGGATTCAAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA10.11682242990654204No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGCTTAAAGGGAGTGTA10.11682242990654204No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.11682242990654204No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA10.11682242990654204No Hit
CACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA10.11682242990654204No Hit
TACGGAGGGTACAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA10.11682242990654204No Hit
TACGTAGGGCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCTTGTA10.11682242990654204No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGAGCGTA10.11682242990654204No Hit
TACGACGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTA10.11682242990654204No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.11682242990654204No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.11682242990654204No Hit
TACGTAGGGTCCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.11682242990654204No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA10.11682242990654204No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.11682242990654204No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.11682242990654204No Hit
TACGTAGGGTGCAAGCGTTATTCGGAATTACTGGGCGTAAAGCGTGCGCA10.11682242990654204No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGCA10.11682242990654204No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGTTTAATGGGAGCGTA10.11682242990654204No Hit
TACGTAGGTTGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA10.11682242990654204No Hit
TACGAAGGTGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGCGCGCGCA10.11682242990654204No Hit
TACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGTGCA10.11682242990654204No Hit
TACGAAGTGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTA10.11682242990654204No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.11682242990654204No Hit
GACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCATAAAGCGTCTGTA10.11682242990654204No Hit
TACGGAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.11682242990654204No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.11682242990654204No Hit
TACGCAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.11682242990654204No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.11682242990654204No Hit
GACGAAGGATGCAAGCGTTATCCGGATTCATTGGGCTTAAAGGGAGCGTA10.11682242990654204No Hit
TACGTATGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA10.11682242990654204No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA10.11682242990654204No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGCA10.11682242990654204No Hit
TACGGAGGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGAGCGCA10.11682242990654204No Hit
TACGGAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.11682242990654204No Hit
TACGGATGGTGCAAGCGTTGTCCGGATTTATTGGGTTTAAAGGGCGCGCA10.11682242990654204No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGGGCTTGTA10.11682242990654204No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCGG205.3827534E-8254.69232195
AAGGCAG205.3827534E-8254.69232195
AGGGGGC202.5776535E-7194.764716
GGATGCA100.0024399823194.764717
CGGAGGG100.0024399823194.764713
AGGATGC100.0024399823194.764716
GGTCCCG202.5776535E-7194.764717
TACGGAG100.0024399823194.764711
GATGCAA100.0024399823194.764718
CGAAGGG202.5776535E-7194.764713
CGAAGGA100.0024399823194.764713
AAGGGGG202.5776535E-7194.764715
GTCCCGA202.5776535E-7194.764718
GGGGGCT202.5776535E-7194.764717
TACGAAG100.0024399823194.764711
GACGAAG202.5776535E-7194.764711
AGGTCCC202.5776535E-7194.764716
GTAGGTC202.5776535E-7194.764714
ATGCAAG100.0024399823194.764719
AAGGATG100.0024399823194.764715