FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005301698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences856
Sequences flagged as poor quality0
Sequence length200-201
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG11213.084112149532709No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGAGCCAGGT576.658878504672897No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG576.658878504672897No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG495.724299065420561No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGG354.0887850467289715No Hit
CCTGTTCGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTTACAGCCCAGAG333.8551401869158877No Hit
CCTGTTCGCTACCCATGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAG303.5046728971962615No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATGAGCGTCAGTACATTCCCAAGG283.2710280373831773No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG273.1542056074766354No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG252.9205607476635516No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGAAGAGGTCCAGCG192.219626168224299No Hit
CCTGTTTGCTCCCCACGCTTTCGAGTCTTAGTGTCAGTAACCGTCCAGAT192.219626168224299No Hit
CCTGTTCGCTCCCCATGCTTTCGCTCCTCAGTGTCAGTAACAGCCCAGAG182.102803738317757No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTATCGGCCCAGAG182.102803738317757No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTATTAGGCCAGAT182.102803738317757No Hit
CCCGTTTGCTCCCCTAGCTTTCGCGCCTCAGTGTCAGTTTCGGTCCAGGA171.9859813084112148No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAGTATCGAGCCAGTG171.9859813084112148No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGGGCCAGTG151.7523364485981308No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG141.6355140186915886No Hit
CCTGTTTGCTCCCCATACCTTCGTGCCTCAGCGTCAGAATTCAGCCAGAT131.5186915887850467No Hit
CCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCA121.4018691588785046No Hit
CCTGTTTGATCCCCGCACTCTCGTGCCTGAGCGTCAATACTGGCCCAGCC121.4018691588785046No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAA121.4018691588785046No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGT101.1682242990654206No Hit
CCTGTTTGCTACCCACGCTTTCGTGCCTCAGTGTCAGTTCAGGCCCAGGC80.9345794392523363No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGGCCAAAA80.9345794392523363No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG70.8177570093457943No Hit
CCTGTTTGCTACCCACGCTTTCGAATCTCAGTGTCAATATTATGCCAGGA70.8177570093457943No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTG60.7009345794392523No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA60.7009345794392523No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTAATCGTCCAGTA40.46728971962616817No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC30.35046728971962615No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGTGTCAGTATGATGCCAGGG30.35046728971962615No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA30.35046728971962615No Hit
CCCGTTCGCTCCCCTGGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAA20.23364485981308408No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAACGTCAGTTGTCGTCCAGTA20.23364485981308408No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTGAGCGTCAATACTGGCCCAGCC20.23364485981308408No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC20.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG20.23364485981308408No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGCA20.23364485981308408No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG20.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAA20.23364485981308408No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGGCCAGAT20.23364485981308408No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGTA20.23364485981308408No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCATGAGCGTCAGTACAGGTCCAGGG10.11682242990654204No Hit
CCTGTTTGCTCCCCAAGCTTTCGAACCTCAGCGTCAGTTACAAGCCAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACCGACCAGAG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTGCGAGCCTCAGTGTCAGTTACAGTTTTGTG10.11682242990654204No Hit
CCCGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTCAGGCCCAGCA10.11682242990654204No Hit
CCTGTTTGCTACCCACGCTTTCGAGCATGAACGTCAGTGTTATCCCAGGA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTGAGCGTCAGTGTTATCCCAGGG10.11682242990654204No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACAGACCAGAG10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTCGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCAAACCTTCGTGCCTCAGCGCCAGAATTCAGCCAGAT10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGGTCCAGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGCGCCAGGT10.11682242990654204No Hit
CCTGTTCGCTCCCCTCGCTTTCGAGCCTCAGCGTCAGTTGCAGTCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCATGAGCGTCAGTACAGGTCCAGGG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGCGTCAATACCTGTCCAGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAACGTCAGATATAGTTTGGTA10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTCTCGCGCCTGAGCGTCAATACTGGCCCAGCC10.11682242990654204No Hit
CCTGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTACAGTCCAGTA10.11682242990654204No Hit
GCTGTTTGATCCCCGCACTTTCGAGCCTCAGTGTCAGTTACAGTTTTGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCTTCAGCGTCAGTTACGGCCCAGTG10.11682242990654204No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTCAGCGTCAGTTGCGCTCCAGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG10.11682242990654204No Hit
CCCGTTCGCTCCCCTTGCTTTCGCTTCTCAGCGTCAGTTTTCGTCCAGAC10.11682242990654204No Hit
CCTGTTTGCTCCCATACCTTCGTGCCTCAGCGTCAGAATTCAGCCAGATA10.11682242990654204No Hit
CCTGTTCGCTACCCGCACTTTCGAGCCTAAGCGTCAGTTGCGCTCCCGTC10.11682242990654204No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGTGTCAGTTGCAGCTTAGAA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATCAGCGTCAGTTTTATCCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAATCCAGAG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTAGTG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTTGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGTG10.11682242990654204No Hit
CCTGTTCTCTCCCCACGCTTTCTATCCTGGTCTTCATTTCCATTCCCTAG10.11682242990654204No Hit
CCTGTTTGCTCCCCTAGCTTTCGCACTTCAGCGTCAGTTACAGTCCAGTG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGGGTCAGTTACAGTTTTGTG10.11682242990654204No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTAACCGTCCAGAT10.11682242990654204No Hit
CCTGTTCGCTACCCGCACTTTCGCGCCTAAGCGTCAGTTACACTCCCGTA10.11682242990654204No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTAAGCGTCAGTAGCGGTCCAGTA10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGTGCCTCAGTGTCAGTTACAGTTTTGTG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCTTCAGCGTCAGTTACAGTCCAGTG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAG10.11682242990654204No Hit
CCTGTTCTCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCACCTCAGTGTCAGTATTCTGCCAGGA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTTTTATCCCAGGG10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCACCTCAGCGTCCAATTTCGTCCAGCC10.11682242990654204No Hit
CCCGTTCGCTCCCCTAGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAA10.11682242990654204No Hit
CCTGTTGGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGAGCCAGGT10.11682242990654204No Hit
CCTGTTCGCTCCCCCCGCTTTCGCGCCTCAACGTCGGTCTCGGCCCAGAG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTCTCGTTCCTGAGCGTCAATACTGGCCCAGCC10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAG10.11682242990654204No Hit
CCTGTTCGATACCCGCACTTTCGAGCTTAAGCGTCAGTTGCACTCCGGTC10.11682242990654204No Hit
CCTGTTCGCTCCCCTCGCTTTCGCACTTCAGCGTCAGTTATCGTCTAGTG10.11682242990654204No Hit
CCCGTTCGCTCCCCGGACTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA10.11682242990654204No Hit
CCTGTTCGCTCCCCTCGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCATACCTTCGCTCCTCAGCGTCAGATTTCATCCAGAT10.11682242990654204No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC10.11682242990654204No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAC10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGGAACGGCCCAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTTACAGCCCAGCG10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGAGCCAGGT10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGCTCCAGGT10.11682242990654204No Hit
CCCGTTCGCTCCCCTGACTTTCGCGCCTCAGCGTCAGTTGTCGTCCCGAC10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCCTTCGATCTTCAGCGTCAGTTACACACCAGTC10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTAATGGCTTGGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGCGTCAGTTACAGTCCAGTA10.11682242990654204No Hit
CCTGTTCGCTCCCCTCGCTTTCGCTCCTCAGCGTCAGTTACGGTCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCAGGCTTTCGAGCCTCAGCGTCAGTTACCGACCAGAG10.11682242990654204No Hit
CCTGTTCGATACCCGCACCTTCGCGCTTAAGCGTCAGTTGCGCTCCCGTC10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCATTGTCAGTATCGGGCCTGTG10.11682242990654204No Hit
CCTGTTTGCTCCCAACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGG10.11682242990654204No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAACGTCAGTTTTCGTCCAGTA10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTGTGGTCCAGAA10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGCGCATGAGCGTCAGTACAGGTCCAGGG10.11682242990654204No Hit
TCCGGACGCTCCCCTGGCTTGGGCCCCGCCGCGTCATCCTTTTTCCTCCC10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTATCGTCCAGAA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACAGTCCCGTA10.11682242990654204No Hit
CCTGTTTGATCCCCACGCTTTCGAGCCTCAGCGTCAGTTACACGCTAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGGCCAGAG10.11682242990654204No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCCGTA10.11682242990654204No Hit
CCTGTTCGATCCCCGCACTTTCGCTCTTCAGCGTCAGTTGCGCTCCAGTG10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTCTCGTGCCTAAGCGTCAATACTGGCCCAGCC10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTTTTGTG10.11682242990654204No Hit
CCTGTTCGCTCCCCACACCTTCGCTTCTCAGCGTCAGTTACACCCCCGAC10.11682242990654204No Hit
CCTATTTGCTCCCCACGCTTTCGGGACTGAGCGTCAGTTATGCGCCAGAT10.11682242990654204No Hit
CCTGTTTGCTCCCCACACTTTCGCACTTGAGCGTCAGTACATTCCCAATG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACTAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGTCCAGAG10.11682242990654204No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGTGCTCCCGTA10.11682242990654204No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTAAGCGTCAGTTACACTCCCGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCTAGCTTTCGCACTTCAGCGTCAGTTACCGTCCAGTG10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTGATCGTCCAGAA10.11682242990654204No Hit
CCTGGTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTACAGGTCCAGGG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGCCAGTTACAGACCAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCTCGCTTTCGCTCTTCAGCGTCAGTTACTGTCCAGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCAGGCTTTCGAACCTCAGCGTCAGTATTAGGCCAGAT10.11682242990654204No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTATTAGTCCAGAT10.11682242990654204No Hit
CCTGTTTGATCCCCACACTTTCGCACCTCAGCGTCAGTTTCCGTCCCGTC10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTTAGCGTCAGTAACCGTCCAGAT10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTATCGAGCCAGTT10.11682242990654204No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTATTAGACCAGAT10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCTTCAGCGTCAGTTTTCGTCCAGAA10.11682242990654204No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTAGTCCAGAT10.11682242990654204No Hit
CCTGTTTGATCCCCGCACCTTCGCGCTTCAGCGTCAGTTGCGCTCCCGTC10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGATCCTCAGCGTCAGTTACAGACCAGAG10.11682242990654204No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCCGCTTCAGTTACGGCCCATAG10.11682242990654204No Hit
CCTGTTCGCTCCCCATACTTTCGCTTCTCAGCGTCAGTTACAGTCCAGAG10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCCTTCGAGCCTCAACGTCAGTTATCGTCCAGTA10.11682242990654204No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGTGTCAGTTACAGTCCAAAA10.11682242990654204No Hit
CCTGTTTGATCCCCGCACTTTCGAGCCTCAGCGTCAGTTACAGTCTCGTG10.11682242990654204No Hit
CCCGTTCGCTCCCCTGGCTTTCGAGCCTCAGCGTCAGTTGCAGTCCAGAA10.11682242990654204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)