FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005301845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005301845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences991
Sequences flagged as poor quality0
Sequence length198-201
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA19019.17255297679112No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA858.577194752774975No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA515.146316851664985No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA454.540867810292633No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA363.632694248234107No Hit
TACGGAGGGCGCGAGCGTTACCCGGATTTACTGGGCGTAAAGGGCGTGTA323.229061553985873No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGTA292.9263370332996974No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA282.825428859737639No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA232.320887991927346No Hit
TACGGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA202.0181634712411705No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGTGCGTA202.0181634712411705No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA202.0181634712411705No Hit
TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTA191.917255297679112No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATCACTGGGCGTAAAGGGCGCGTA191.917255297679112No Hit
TACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGCGTGCGTA171.7154389505549947No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA171.7154389505549947No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA141.4127144298688195No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA141.4127144298688195No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA141.4127144298688195No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA121.2108980827447022No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA101.0090817356205852No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTA101.0090817356205852No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA101.0090817356205852No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA90.9081735620585267No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA90.9081735620585267No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA80.8072653884964682No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA80.8072653884964682No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA80.8072653884964682No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA80.8072653884964682No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGTGCGTA80.8072653884964682No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA70.7063572149344097No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTA70.7063572149344097No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA70.7063572149344097No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA60.6054490413723511No Hit
TACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA60.6054490413723511No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA60.6054490413723511No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTCACTGGGTTTAAAGGGTGCGTA60.6054490413723511No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGAGCGTA60.6054490413723511No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA50.5045408678102926No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA50.5045408678102926No Hit
TACTGAGGGAGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTA50.5045408678102926No Hit
TACGAAGGGGGCTAGCGTTACTCGGAATTACTGGGCGTAAAGGGCGCGTA50.5045408678102926No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGTA50.5045408678102926No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGTA50.5045408678102926No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA40.4036326942482341No Hit
TACGGAAGGTCCGGGCGTTATCCGGAATTATTGGGTTTAAAGGGAGCGCA40.4036326942482341No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA40.4036326942482341No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA40.4036326942482341No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA30.30272452068617556No Hit
TACGTAGGGCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA30.30272452068617556No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA30.30272452068617556No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA30.30272452068617556No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA30.30272452068617556No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA30.30272452068617556No Hit
TACGTAGGTCCCGAGCGTTGCATCTAGGCGGCCAGATAAGTCTGGGGTGA20.20181634712411706No Hit
TACGAAGGGAGCTAGCGTTGTTCGGAATCACTGGGCGTAAAGCGCACGTA20.20181634712411706No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA20.20181634712411706No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA20.20181634712411706No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA20.20181634712411706No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA20.20181634712411706No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA20.20181634712411706No Hit
TACGTAGGGTGCGAGCGTTATTCGGAATTACTGGGCGTAAAGCGTGCGCA20.20181634712411706No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGCGCGCA10.10090817356205853No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.10090817356205853No Hit
TACGGAGGGTGCGAGCGTTATTCGGAATAACTGGGCGTAAAGGGCACGCA10.10090817356205853No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA10.10090817356205853No Hit
TACGTAGGGTGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCTCGTA10.10090817356205853No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA10.10090817356205853No Hit
TACGTATGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA10.10090817356205853No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGGAAGGTTCGGGCGTTCTCCGGATTTATTGGGTTTAAAGGGAGCGTA10.10090817356205853No Hit
TACGTAGGGTGCAAGCGTTATTCGGAATTATTGGGCGTAAAGCGTGCGCA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.10090817356205853No Hit
TACGGAGGGCGCAAGCGTTATCCGGATTTACTGGGCTTAAAGGGTGCGTA10.10090817356205853No Hit
TACGGAGGATGCGAGCGTTATTCAGAATCATTGGGTTTAAAGGGTCTGTA10.10090817356205853No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATCGGGTTTAAAGGGAGCGTA10.10090817356205853No Hit
TACGTAGGGTGCGAGCGTTTTCCGGATTTGTTGGGCGTAAAGGGCTCGTA10.10090817356205853No Hit
TACGTAGGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGTGTA10.10090817356205853No Hit
TACGTAGGTCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.10090817356205853No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTTGTA10.10090817356205853No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.10090817356205853No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGCGCGTA10.10090817356205853No Hit
TACGTAGGGTGCAAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGCA10.10090817356205853No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGCGCATCTA10.10090817356205853No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAATCGCGTCTA10.10090817356205853No Hit
TTTAACCGGACGCTCGACGCCATTAATAATGTTTTCCGTAAATTCAGCGC10.10090817356205853No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGCA10.10090817356205853No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA10.10090817356205853No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.10090817356205853No Hit
TACGTAGGGTGCGAGCGTTAATCGGCATTACTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTTCGGAATTATTGGGCGTAAAGGGCTTGTA10.10090817356205853No Hit
TACGGAGGATGCGAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTA10.10090817356205853No Hit
TACGTATGTCACGAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTTGTA10.10090817356205853No Hit
TACGTATGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACGGATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCGTAAAGGGCATCTA10.10090817356205853No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGCA10.10090817356205853No Hit
TACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAACGGGTGCGTC10.10090817356205853No Hit
TACAGAGACTGCAAGCGTTATTCGGATTCACTGGGCGTAAAGGGTGCGCA10.10090817356205853No Hit
TACGTATGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA10.10090817356205853No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.10090817356205853No Hit
TACGTAGGGTGCGAACGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.10090817356205853No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGAGTGTA10.10090817356205853No Hit
TACGGAGGGCGCGAGCGTTATCCGGATTTACTGGGCGTAAAGGGCGTGTA10.10090817356205853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAACGCGAGCGCA10.10090817356205853No Hit
TACGGAAGGTCCTGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.10090817356205853No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA10.10090817356205853No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGCGCGTCTA10.10090817356205853No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACAAGTAAGACTAGTGTTATTCATCTTTATTAGGTTTAAAGGGTACCTA10.10090817356205853No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGATCGCA10.10090817356205853No Hit
TCCGTAGGGAGCGAGCGTTGTCCGGAATTCCTGGTTGTAAAGGGAGCGTC10.10090817356205853No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA10.10090817356205853No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGGGCGCA10.10090817356205853No Hit
TACGTAGGGCGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA10.10090817356205853No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCACGCA10.10090817356205853No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGTGTA10.10090817356205853No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.10090817356205853No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA10.10090817356205853No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA10.10090817356205853No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTTTAAAGGGAGCGTA10.10090817356205853No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGGCGG207.190647E-8246.73332195
AAGGCAG350.0246.73332195
GGCGCGA252.6630005E-9194.789478
AGGGCGC302.3646862E-11194.789476
GCGCGAG252.6630005E-9194.789479
CGTAGGG550.0194.789473
GTAGGGC252.6630005E-9194.789474
GGTGGCA152.7151098E-5194.789477
TAGGGCG252.6630005E-9194.789475
AGGGGGC100.0024892024194.789466
GTGCAAG202.7742863E-7194.789469
AGGGTGC202.7742863E-7194.789466
ACGTAGG800.0194.789462
AGGTGGC202.7742863E-7194.789466
TACGTAG800.0194.789461
GTAGGGT202.7742863E-7194.789464
TAGGGTG202.7742863E-7194.789465
TAGGGGG100.0024892024194.789465
GGTGCAA202.7742863E-7194.789468
CGTAGGT307.925337E-9162.324553